Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842: Ldb1001
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Entry
Ldb1001 CDS
T00364
Symbol
addA
Name
(GenBank) ATP-dependent deoxyribonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
ldb
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
Brite
KEGG Orthology (KO) [BR:
ldb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ldb03400
]
Ldb1001 (addA)
Enzymes [BR:
ldb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ldb1001 (addA)
DNA repair and recombination proteins [BR:
ldb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Ldb1001 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
Viral_helicase1
AAA_12
PDDEXK_1
AAA_30
ResIII
AAA_16
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CAI97803
UniProt:
Q1GAA9
LinkDB
All DBs
Position
857272..860955
Genome browser
AA seq
1227 aa
AA seq
DB search
MAVKYTPDQARAIESRGQDLLVSASAGSGKTSVLVERVIREIMDDHLEVNQLLVITFTRA
AASEMKQRIKQRLQDRLQEETDASQADFLRRQLAEIDTAIISTIDSFCLDVIRRFYFAID
IDPDFSILTDATQIELLKERALRDVENGYLQNEDQAKKDRFLALYDAFAGDSNANSARDL
LLDLYQFAMARPNYRAWLQKLAAPYQLETSDVVDSALWQEKIKPYLEEEFSNLADKLTAL
MAEADFDHEKFAKYQPAFTAFATSLASYRESLATDDPFDRQRELLAACQFDGTLRTNKEI
ADFVEEAKEVKEAGKQLVFNVYTGFYASSNADQQALLAKGAEIASAAAEVELAFIDRFNE
LKRADRVLDFSDMEQLAYEILTQDSSNSDLARAYYQSRFKEIMVDEYQDTNALQDGLIQR
LKKAGKNNLFMVGDVKQSIYGFRQAEPSLFIAKYDEYGQENSAGKQRIIFAENFRSSQPV
TQAVNLIFDSLLTKDFGGIDYQKEGQLKFAAGYDPEAALPTETEVLYQEDSSATDDDGEL
NQGDLAMVISRIQKLIADQTPIFDPKTGQTRPVSYGDIAILTRSKTSNLDIKQEFDRYGV
PLFVMDVQNYFQTFELTVIMSYLKIIDNPDQDIPLVAVLRSPIFNFSSSDLAEIRLVNKS
VSFYAALRTYAKKDTDLAARCRDFLAQLQDLRDFSLSHRISELLWTIYERTSFLEIVTAM
TNGQQRRLNLTALYERASAYESSGFKDLYQFINFIARMRKNQKDLAQPILSENAGNSVKL
MTIHASKGLEFPVVFVLGLEHRYNYQQDITGSYVLDASGLGLSFAYPFDEAEYRADTLAN
VWLKIAKKQKLLEEEARLLYVALTRAKQKLILAANIKLPARTDLAGLEEKWAKEISAGRL
TLLDKMKVAKPLDFLAPALARAKQVKRLGEKAVSDLATGQEGSLVFVHFDPKKDQAQLPD
SEAVAASGADLTEDEAAVFKQAEKLYTFSQGGYPYLDASRTTAYQAVSEIKKVFGDPIED
ELADSHISELQSANRYLQPIDTEPDFLFQNTVSSAELGTASHLVLQYYDYAKGDKNAIDS
CIAGLVEKGRLSQTLASMLDREALSWFVKSDFAKDFYQQPDRLHREENFATILSPKTLFK
DFSDFPGKILVHGTIDGYYEAENGIILFDYKTDHVNPRKQEEAIQKLKEKYQGQLRLYER
ALNESGRLPVLKKYLVLLSCREIVEVD
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaaatatacaccagaccaggccagggctattgaaagtcgggggcaggacctt
ttggtttcagcctctgccggctcaggcaaaaccagtgttttggttgaaagggtcatccgg
gaaatcatggacgaccacttggaggttaaccagctcctggtcatcaccttcacccgggcg
gcggccagtgaaatgaagcagcggatcaagcagcgcctgcaggaccgcctgcaagaagaa
acagacgccagccaggccgactttttgcgccggcagctggctgaaatcgataccgcgatt
atttccacgatcgactctttctgtttggacgtcatccgccgcttttacttcgcgatcgac
atcgacccggacttcagcattttgactgacgccacccagattgagcttttaaaggaaaga
gccttgagggatgtcgaaaacggctacctgcaaaatgaggaccaagcgaaaaaagaccgt
ttcctggccctctatgatgcctttgccggcgacagcaatgccaattcagccagagacttg
cttttggatttataccagtttgccatggcccggcccaactaccgggcttggctgcaaaag
ctggctgccccttaccagctggagaccagcgacgtcgttgacagcgccctctggcaggag
aaaatcaagccttacctggaggaagaattttccaacctggcggacaagctgacggctttg
atggccgaagcagactttgaccatgaaaagtttgccaagtaccagccagcttttacggct
tttgccaccagtctggccagctaccgggagagcctggccacagatgatccctttgaccgg
caaagagagctgctggcggcctgccagtttgacgggaccctgcggactaacaaggagatc
gccgactttgtcgaggaggcaaaggaggttaaagaagctggcaagcagctggtcttcaat
gtctataccggtttttacgcaagcagcaatgctgaccagcaggccctcttagccaagggg
gcagaaatcgcctccgcggcagcggaagttgaactggcctttattgaccgctttaacgaa
ttgaagcgggctgaccgggtcctggacttcagcgacatggagcagttggcctatgaaatt
ctgacccaggacagttcaaactctgacctggcccgggcctactaccaaagccgcttcaag
gaaatcatggtcgatgaataccaggacaccaacgccctgcaagacggcttgatccagcgg
ctgaaaaaagcggggaagaacaacctcttcatggtcggggacgtcaagcagtcaatctac
ggcttccgccaggcggaacccagcctgtttatcgccaaatatgatgaatatggccaggaa
aattcggctggcaagcagcggattatttttgccgaaaacttccgctccagccagccggtc
acccaagctgtcaacttgatctttgacagcctcttaaccaaggacttcggggggattgac
taccaaaaagaagggcagctgaaattcgcggctggctatgacccagaggcggccctgccg
actgaaacagaagtcctctaccaggaagattcatctgcaacagatgatgacggggaattg
aaccagggcgatttagccatggtcatcagccggattcagaagctgatcgctgaccagacg
ccaatttttgacccgaagaccgggcagacccggccggtcagctatggggacatcgccatc
ttaacccggtccaagaccagcaacctggacatcaagcaggaatttgaccgctacggggtt
ccgctctttgtcatggatgtccagaactacttccagacctttgaattgacggtcatcatg
tcctacttgaagatcatcgacaacccggaccaggatattcccctggtggcggttttgcgg
tctccgatttttaacttctccagttcagatctggccgaaatccgcctggtcaacaagagc
gtcagcttctacgcggctttaagaacttatgctaaaaaagatacagatctggctgcccgc
tgccgggactttttggcccaattgcaggaccttcgcgacttttccttgagccaccggatt
tcagaactgctctggaccatttacgagcggaccagctttttggaaatcgtgacggccatg
accaacggccagcagcgccggctcaacttgactgccttgtacgaaagagccagcgcctac
gaaagttcgggcttcaaggacctttaccagttcatcaactttattgccagaatgcggaag
aaccagaaggacctggcccagccgatcctgagcgaaaatgctggcaactcagtcaagctg
atgaccatccatgcctcaaaggggctggaattcccggtcgtctttgtcttgggcctggag
caccgctacaattaccagcaagacattaccggcagctatgtcttagatgccagcggcctg
ggcctgtcctttgcctatccctttgatgaagcggaataccgggcagatactttggctaat
gtctggctgaagattgccaaaaagcagaagttgctggaagaagaagcccgcctgctttac
gtagctttgacccgggccaagcagaagctgattttggcggcaaatatcaagctgccagcc
agaaccgacctggcgggcttggaagagaagtgggctaaggaaatttctgctggccgcctg
acccttttggataagatgaaggtagccaagcccctggactttttggccccggctttagcc
cgcgccaagcaggtgaagcggctgggtgaaaaagccgttagcgacctggcgacaggtcaa
gaaggcagtctggtctttgtccactttgaccccaagaaagaccaggcccaattgccggat
agtgaggccgtggcggccagcggggcagacttgacggaagatgaagcagccgtctttaag
caggcagaaaagctctataccttcagccagggcggctatccttacttggatgccagccgg
accacggcctaccaggcggtgtctgaaatcaagaaggtttttggcgacccgatcgaagac
gaactggctgactcccacatttcggaactgcagtcagccaaccgctacctgcagccgatc
gatactgaacctgacttcctcttccaaaatacggtcagctcagctgaactggggacagcc
agccacctggtcttgcagtattatgactatgccaaaggcgacaagaatgccattgacagc
tgcattgccggcctggtggaaaagggccggctgagccagaccttggccagcatgctggac
cgggaagccttgtcctggtttgtcaagagcgactttgccaaagacttttaccagcagcct
gaccgcctccaccgggaggaaaattttgccaccatcctgtcgccgaagactttatttaag
gattttagcgattttccaggaaaaattttggttcacgggacaatcgatggctattatgaa
gcggagaatggtatcattttatttgactacaagactgaccacgtgaacccgcgtaagcaa
gaggaagcaattcagaagctgaaagagaagtaccagggccagttgcgcctttatgagcgg
gccttgaatgaatctggccggctgcctgttttgaaaaagtacctggtgcttttgagctgc
cgggaaattgttgaagttgattag
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integrated database retrieval system