Leptospirillum sp. Group II: ABH19_08365
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Entry
ABH19_08365 CDS
T04007
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
leg
Leptospirillum sp. Group II
Pathway
leg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
leg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABH19_08365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
leg03019
]
ABH19_08365
03016 Transfer RNA biogenesis [BR:
leg03016
]
ABH19_08365
Enzymes [BR:
leg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABH19_08365
Messenger RNA biogenesis [BR:
leg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABH19_08365
Transfer RNA biogenesis [BR:
leg03016
]
Prokaryotic type
tRNA degradation factors
ABH19_08365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
Motif
Other DBs
NCBI-ProteinID:
AKS23754
LinkDB
All DBs
Position
complement(1637410..1639551)
Genome browser
AA seq
713 aa
AA seq
DB search
MNPIFVEAVVGGKTVRLETGRMAKQADGSVVVWADGTVVIATAVASKVSKPGVDFLPLTV
DYQERAYAAGKIPGGFFKREGKPSEREILNSRLIDRPLRPLFPEGFFFDTQLIASVISID
RGGISDVMAVVASSAALYVSDIPFMNPVAAVKVGCVDGTFIVNPTLDEQERSTLDLVVAG
TRDAIMMVEGQGNEISEETFLSAIDLAHKSILPLIEAQEKLRAMAGKEKRPLPAVPIPPK
VMDMVESMGAPRLREALKIAVKQERQEQTAQILGDVREKILQEFSASSPEMIVEEREIFN
AFHELERRIMREMILDHKVRADGRGLSDIRPITIEVGILPRTHGSALFTRGETQSLSVAT
LGTSDDEQRIDALEGESTKRFMLHYNFPPFSVGETKPMRGPGRREIGHGNLAERALKPVL
PARDSFPYSIRLVSDILESNGSSSMATVCGGSLAMMDAGIPIKSAVAGIAMGLIKEGDRI
AILSDILGLEDHLGDMDFKVTGTENGITAVQMDIKITGITVELMRESLQKAREGRLYIME
KMKMALPSSRNNMSPFAPRILTLKIKQDKIREVIGPGGKVIRGITEKTGAKIEIDDSGLI
QIASTDEVAAQKAIDMINQIVEEVQVGKIYLGRVKTVADYGAFVELFPGTTGLCHISQLE
DRRVEKVSDVVSEGDLILVKALEVDRQGKIRLSRKEAIAEVGADREVRVGSGR
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatctttgttgaagccgttgttggtggaaaaacggtccggctggaaactggc
cgcatggccaagcaggcagacgggtcagtcgtcgtctgggcggatggtaccgttgtcatc
gcaacggctgttgcctcaaaggtcagtaaacctggcgtcgattttttgcctttgacggtc
gattatcaggagagagcttatgctgcaggaaaaattcccggcgggttctttaaacgtgaa
ggaaagccgtcagaacgcgaaattctgaacagccgactgatcgatcggccattgagacca
ctttttccggaagggtttttctttgatacccaactgattgcaagtgttatttctatcgat
cgcggcggaatttcggatgtgatggctgttgtcgcatcctcggcagcgctttatgtctcg
gatatcccgttcatgaatcctgttgctgcggtgaaggtagggtgtgtagacggaacgttt
atcgttaatccgacactggatgagcaagaacgttcaaccctggaccttgttgttgccggc
actcgcgatgccattatgatggtcgagggacagggaaatgagatctcggaggaaacattt
ctgtctgccattgatttggcccacaaatctattcttcccttgatcgaagctcaggaaaag
cttcgggcaatggcaggaaaagaaaaaagacctctccctgctgtgccgattcctccaaaa
gtgatggatatggtggagtcgatgggagcgccaagactccgtgaagccttgaaaattgcg
gtgaaacaagagcgccaggaacagacagcacaaattttgggagatgtccgggaaaagatt
cttcaggagttttccgcaagcagtcccgaaatgattgttgaagagcgtgaaatctttaac
gctttccacgagctggaacgccgaatcatgcgcgaaatgatcttggaccacaaagtccgg
gctgatggcagaggactctcggatattcgcccgatcacgatcgaggtgggaatccttccc
cggacccacggatcggctttgtttacgagaggagaaacccagagcctctctgttgcgacc
ctgggaacatccgacgatgagcaaagaatcgatgctctggaaggagaatctacaaagcgg
tttatgcttcattataatttccctcccttttcagtcggtgaaacaaaaccgatgagaggt
cccggtcgccgggaaatcgggcacggcaatctggctgaaagagctttgaagccggttctt
ccagcccgggattctttcccttattcgatccgtctggtttcagacattcttgaatcgaac
ggatcgtcatccatggcaacggtttgtggcggatctctggcgatgatggatgcgggtatc
ccgatcaagtctgccgtggcagggattgcgatgggcctcatcaaggaaggggacaggatt
gctattttgtcggacattcttggtctggaagatcacctcggggatatggatttcaaggtg
acggggacggaaaatggtattactgctgttcagatggatatcaaaatcacaggaattacc
gttgaactgatgcgggaatctttgcaaaaagccagggaaggtcgcctttacatcatggaa
aaaatgaagatggccctcccgtcttcccgaaacaacatgtccccctttgccccgcggata
ttgacccttaagattaaacaggacaagataagggaagttatcggaccaggcggaaaggtc
attcggggaatcacagaaaagaccggcgcgaaaattgaaatcgatgactctggattgatt
cagattgcatcaacggatgaggtcgccgcgcaaaaggcgattgatatgatcaaccagatc
gttgaagaggtgcaggtcggcaaaatttatctcggtcgagtaaaaacagttgcagactat
ggggcatttgtggaattatttccgggtacaaccggattgtgccatatctctcagctggaa
gatcgtcgagttgaaaaggtttccgatgtcgtgtccgaaggagacctgattctcgtcaag
gctctggaggtagatcggcaggggaaaatccggctttcccggaaagaggccatcgctgag
gtgggggccgatcgggaggtccgggtcggcagcgggcgctga
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