KEGG   Laceyella sacchari: C1X05_09540
Entry
C1X05_09540       CDS       T05304                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lfb  Laceyella sacchari
Pathway
lfb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lfb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C1X05_09540 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lfb03019]
    C1X05_09540 (rny)
Messenger RNA biogenesis [BR:lfb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C1X05_09540 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD ATP-synt_B OmpH KhpA-B_KH AAA_15 KH_2 Exonuc_VII_L
Other DBs
NCBI-ProteinID: AUS10442
LinkDB
Position
complement(1897346..1898887)
AA seq 513 aa
MFEPIDIILLFASLGVGLGAGYWMRKTAAEARIGSAEKEAAEIIEKADKEAEALKKEKIF
EARDEAHRLRSEAEKEIREQRNELQRIERRLNQKEETLERKQHAIEQREDELNGKEKEIG
LRQQEIDELYQEQRKEMERISGLTTEEARQLILAKVENEMRHETAQIIKEMEQQAIEEGD
RRARRILSLAIQRCAADHVAETTVSVVSLPNDEMKGRIIGREGRNIRTLETLTGIDLIID
DTPEAVILSGFDPIRREVARVALEKLVADGRIHPARIEEMVEKSRRDVDERIREYGEQAT
FETGVHGLHPDLIKIIGRLKFRTSYGQNVLKHSMEVAHLSGLLAAELGEDIHLAKRAGLL
HDIGKAIDHEIEGSHVDIGVELAKKYNEHPIVINSIASHHGDCEATSVIAVLVRAADALS
AARPGARRETLEAYIKRLEKLEEICESFDGVEKSYAIQAGREVRIIVKPDEVDDAEATRL
AREITKQIENQLDYPGHIKVTVIRETRSVEYAK
NT seq 1542 nt   +upstreamnt  +downstreamnt
gtgtttgaaccgattgacatcattctgctgtttgcctctctcggagtcggactcggtgcg
ggatactggatgaggaaaacggcagcagaagcaagaatcggaagcgccgagaaggaagct
gccgagatcatagagaaagctgacaaagaagcagaagcgctcaaaaaagagaagatcttt
gaagcgcgggatgaagcgcatcgcctgcggagtgaagcggaaaaagagattcgcgagcaa
cgcaacgaattgcaacgaatcgaacgccggttaaatcaaaaagaagagacgctcgaacgc
aagcaacatgcaattgaacagcgtgaagatgaactgaacggaaaagaaaaggaaatagga
ttacgccaacaagagattgatgagctataccaggaacagagaaaagaaatggaacggata
tctggattaaccaccgaagaagcgagacagctcattctggcgaaagtggagaatgagatg
cgtcatgaaaccgcgcaaatcatcaaagagatggaacagcaagcgatcgaagaaggagat
cgacgggctcgccggatcttgtcgttggcgatccaacggtgcgcggcggatcacgtggcg
gaaacgaccgtctccgtcgtgtccttgccaaatgatgaaatgaaaggacgaatcatcggt
cgggaagggcgcaatatccgcacattggaaactttgaccgggatcgacctcatcattgat
gatacgccggaagccgtcatcttgtcagggtttgacccgattcgccgtgaagtggcccgc
gtggcgctggaaaaattggttgccgacggacgtattcatccggcgcgaatcgaagagatg
gtggaaaagtcacgccgcgatgtggacgagcgcatccgcgaatacggggagcaagccaca
tttgaaacgggcgtgcacggtttgcatccagatttgatcaagatcatcggccgattgaaa
ttccgaacaagttacggacagaatgtgttgaagcattcgatggaggtagcccatctgtca
ggattgttggcggctgagctgggtgaagatattcacttggcgaagcgagcagggctgttg
catgatatcggtaaagcgatcgaccatgaaatcgaagggtcgcacgtggatatcggtgtc
gaattggctaagaaatacaatgagcatcccattgttatcaacagcatcgcttcccaccac
ggggactgtgaagcgaccagcgtgatcgcggttttggttagggcggcagatgcgttgtcc
gcggccagaccgggggcgcggagagaaacgctggaagcgtacatcaaacgtttggaaaag
ctggaggaaatctgcgagtcttttgatggtgtggagaaatcatatgccattcaagctgga
cgggaagtgcggatcatagtgaagccggacgaagtggatgacgcagaagcgacgcggttg
gcccgtgaaatcacgaagcaaatcgaaaaccaactggactatcccggccatatcaaagta
acggtcatccgggaaacgagatcggttgagtacgcgaaataa

DBGET integrated database retrieval system