Leptospirillum ferriphilum ML-04: LFML04_0919
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Entry
LFML04_0919 CDS
T02319
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LFML04_0919 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfi03400
]
LFML04_0919 (xseA)
Enzymes [BR:
lfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LFML04_0919 (xseA)
DNA repair and recombination proteins [BR:
lfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LFML04_0919 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFS53151
UniProt:
J9ZAH4
LinkDB
All DBs
Position
858896..860407
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AA seq
503 aa
AA seq
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MKVAGTPDFQNDIRTVFTVSELTEGIGLAIEGAFPGFLHVEGEVSNLKESSSGHAYFTLK
DSSSQIRGVFFRGQRRNERFLPRDGDQVLATGRLTLYRPRGEYQIVVHTMEPAGIGKFFL
EFRRVQHTLQEEGLLRPDRKRPLPAYPFKIALVTSLKGAVVWDFLRIAGSRNPAVSIVIL
PVRVQGDGAVEDIVEAFTRSIPRIDALDAVVIARGGGSIEDLWPFNSERLARTILSCPVP
VVSAVGHETNVTIADLVSDLRVATPSEAAEKLVPHSGELQRRVKGAFDRLTHVLLNELRK
ENLRYFRARDRLFLWPHQIVSFHQRRERSEGRLISIVERKNHSFSMERQEIHQRLEQSVF
HLLRQKRAFLEKTASRIKTPYALYVLKREKQESLKGRLQTSMARVLSFSSLRQGGGQDRL
VKSMRNRLEEFRSMHRTLTERLQAATPFSALEKGFAILFHARDRTLVSPARLPHSGEILL
ARIPGFEIGLEVRSVETWTGDGR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtggcaggaaccccggacttccagaatgacatccggactgtctttacggtctct
gagctgacggaagggatcggtcttgccatcgagggagctttccctggattccttcatgtg
gaaggggaggtttcaaacctgaaagaatcgtcctccggacatgcttattttaccctgaag
gactcttcctcccagattcggggagtttttttccggggacagcgcagaaatgaaaggttc
ctccccagagacggtgaccaggttctggccacaggccgactgaccttataccgtcctcgc
ggagaatatcagattgtcgtccatacgatggagcctgccgggatcggaaagttttttctc
gaattccgtcgtgtgcagcacacgctgcaggaggaaggccttctgcgacctgaccggaag
cgacctcttccggcctaccctttcaagatcgccctcgtgacttctcttaaaggggctgtc
gtctgggactttcttcgaattgcagggtcaaggaaccccgctgtttcgatcgtgattctt
cccgttcgtgtccagggggacggggcggtggaagatattgtcgaggcgtttacccggagt
attccccggattgacgctctggatgctgtcgtcattgcccggggtggaggaagcatcgag
gacctttggccgttcaacagtgaacggctggcccggacgattctgtcctgcccggtgccg
gtggtttctgctgtcggtcatgaaaccaatgtcaccattgcggacctcgtatccgacctc
cgtgtggcgactccgtctgaagcagcggaaaagctggtccctcactccggagagcttcag
aggagagtcaaaggagcttttgaccgtctgacacatgttctcctgaacgagttaaggaag
gaaaaccttcgctattttcgagcgagggatcggctgtttctctggccgcatcagattgtg
tccttccatcagcgccgagagagaagtgaaggccgtctgatctcgattgtggaaagaaaa
aatcattccttttctatggaaaggcaagagattcatcagcgcctggagcaatctgttttt
catcttctgagacaaaagagggcttttctggaaaagacggcatccagaatcaagaccccc
tatgctctatacgttctcaagagagaaaaacaggaatcactgaagggacgcttgcagaca
agcatggcgagagttctctctttttcctccctccgccagggaggggggcaggataggttg
gtcaagtccatgagaaaccggctggaggaattccggtcgatgcaccggacgcttaccgaa
cgtctccaggcggcgacccctttttcggctcttgaaaaaggttttgcgattctttttcat
gcgcgtgatcggacgctggtttctccagcccgtttaccgcattccggagaaattcttctg
gcccgaattcctggtttcgaaattggactggaagttcgatcggtcgagacctggacaggt
gacgggaggtaa
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