Limosilactobacillus fermentum CECT 5716: LC40_0792
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Entry
LC40_0792 CDS
T01958
Name
(GenBank) Transposase
KO
K07485
transposase
Organism
lfr
Limosilactobacillus fermentum CECT 5716
Brite
KEGG Orthology (KO) [BR:
lfr00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
LC40_0792
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_ISL3
zf-ISL3
HTH_Tnp_ISL3
Trp_repressor
HTH_3
Spore_GerQ
HTH_23
CENP-B_N
HTH_38
zinc_ribbon_4
Lar_restr_allev
DUF6076
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ADJ41393
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Position
1407269..1408555
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AA seq
428 aa
AA seq
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MTDYIKNILQIKDPNLHFTDVIFENNDGWETQVFIGTVSLKLDRCPHCGFADTFIKNGHS
YQTIKYLSINESCPTMLRIGKQRLRCKNCQDSFMAKTNVVDKYCSIAKAVKHKALTMLES
NVSQKDVSKFTGVSPSTIGRLLDSDQALLRFNSRTLPTNIAIDEFRGPQGKYCFIIVDND
TSQIYQILPDRLKSSITHYFDRFSLKERKRVKSVSTDLNSYYQGLVRRYFPNAKLVVDRF
HIVSMLTRAFNQVRVAVMKQFDPNTREYRALKNSWRLYLLKSTSLNYTKEYYDRHLRQKV
TMAERVGIGLDLDPQLAAGYELLQGAMTALEEHDVDQLMDLLFTKWDVPAPFQTVLKTLR
KNSEGVFNATVLPYSNGRVEGINRMIKLIQRTAYGFTNFGHFIARIRLHQMGTEAEKRRR
PVQAPAAA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgactgattatattaaaaatatccttcaaattaaagaccccaatcttcatttcacagac
gttatctttgaaaataatgacggatgggagacgcaggtcttcattgggacggtctcgctt
aaattggatcggtgcccacattgcggctttgcggataccttcattaagaatggccattct
taccaaaccattaagtacctctcaattaacgaaagttgtcccactatgttgcggatcggt
aagcaacgcctgagatgtaagaattgccaagattcgttcatggcgaagaccaacgtcgtt
gataaatactgttccattgccaaagcagttaaacacaaggcacttacgatgcttgaaagt
aatgtctctcaaaaggacgtgtctaagtttaccggtgtgtcacctagtaccattggccga
ctcctagacagtgatcaagcgctccttcgctttaatagtcgcactttacccactaatatt
gccattgatgagttccgtggtccgcaggggaagtattgcttcattatcgttgataatgat
acctcacaaatctaccaaattctccctgatcggcttaagagtagtattacgcattacttt
gatcgattctcgctaaaagagcgcaaacgagtcaaatcagtctcgacagacttaaacagt
tactatcaaggccttgtgcgccgctacttcccaaacgcaaagctggttgtggatcgattc
cacatcgtttcaatgcttacgcgggcgtttaaccaagtccgggtcgcagtaatgaagcaa
ttcgaccctaatacgcgtgagtatcgggcattgaagaattcgtggcgactgtacttactt
aaaagcacatcgcttaactacactaaggagtactatgatcgccacttacgacaaaaggta
acgatggccgaacgggtgggaattggcctggaccttgatccccagttagcggccggttat
gaactcttacagggcgccatgaccgctcttgaagagcacgatgttgaccaattaatggac
ctcttgttcaccaaatgggacgtgccagcgccgttccaaacggttcttaagaccctccgt
aagaacagcgaaggagtgttcaacgcaaccgtattaccgtactcaaacggtcgggttgag
gggatcaaccgcatgatcaagttaattcaacggacggcatatggctttactaactttggt
catttcatcgcccggatccgattgcatcaaatgggaacggaagcagaaaaaaggcggcgc
ccggtgcaagcaccggccgccgcctaa
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