Lactococcus garvieae ATCC 49156: LCGT_1288
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Entry
LCGT_1288 CDS
T01618
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lgr
Lactococcus garvieae ATCC 49156
Pathway
lgr03420
Nucleotide excision repair
lgr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LCGT_1288
03430 Mismatch repair
LCGT_1288
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgr03400
]
LCGT_1288
Enzymes [BR:
lgr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCGT_1288
DNA repair and recombination proteins [BR:
lgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LCGT_1288
MMR (mismatch excision repair)
Other MMR factors
LCGT_1288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Com_YlbF
Motif
Other DBs
NCBI-ProteinID:
BAK58801
LinkDB
All DBs
Position
complement(1286051..1288345)
Genome browser
AA seq
764 aa
AA seq
DB search
MNPLLNGMNEKQAEAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKMVNPWNILAITF
TNKAAREMRERALNLTPAAQDTLIATFHSMCVRILRRDADHIGYNRNFTIIDPGEQKTLM
KRILKEANLDPKKWDPKTLLNTISNAKNDLLDPETYEGQINARNPYELLTARVYKTYQAE
LRKAESMDFDDLIMQTLRLFDKNPDVLAYYQGKFQYIHVDEYQDTNHAQYQLVKLMAQRF
KNICVVGDADQSIYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKTILQAANNVINNN
VNRRPKKLWTQNNDGENILYYRANDERDEAIFAASTISEQVQAGRKYSDFAVLYRTNAQS
RTIEEAFLKSNIPYSMVAGTKFYSRKEIRDVISYLNVIANPRDNMSFERIVNEPKRGVGP
SALEKLRNFADMQGKSLAESTLDITLSDIRGKAAGEIYNLGLIFDFLRSFIESSSITELV
EEMLERTGYMKFLRMQANLEAQTRIENIEEFLSVTKNFDEKSEVPLDEMTGEPIKETGLD
RLSRFLNEVSLLSEVDEYEEASDAVTMMTLHAAKGLEFPVVFLIGMEENIFPLSRVNDDP
DELEEERRLAYVGITRAEEFLYMTNANQRVLYGKTSYNRPSRFISEIDDELLDYGGIARK
ANSSFNASYKTAGGGTLFGTGMSMTDALHQRKAAVNPGASRVIEKTDVATEDWAIGDTAV
HRKWGEGIVLAVTGTGKNMELKIKFPEVGMKRLLAAMAPIEKKE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctttattaaatggaatgaatgaaaaacaagcagaagcagtacaaactacagaa
gggccacttttgattatggcaggtgcgggctcaggaaaaacccgggtactgacgcaccgt
attgcttatcttatcgatgaaaaaatggtgaatccctggaatattttggcgattaccttt
accaacaaagccgcacgtgagatgagagaacgtgcgcttaatttaacaccagcagctcaa
gacacattaattgcaacatttcactcaatgtgtgtccgaatcctccgacgcgatgcagat
catattggttataaccgtaactttacaattattgatccaggggaacaaaaaaccttgatg
aaacgtattttgaaagaggccaacttggatcctaaaaaatgggaccccaaaacgcttctt
aatacgatttcaaacgctaaaaatgaccttctggatccagaaacttatgaaggacaaatc
aatgcgcgtaatccctatgagttattgacagcccgtgtttataaaacctatcaagcagaa
ctccgtaaagcagagtcgatggacttcgatgatttaatcatgcaaactttacgacttttt
gataaaaatcccgatgttttagcttactatcaagggaagtttcaatacattcatgttgat
gaatatcaagataccaaccatgcacaatatcagctcgtcaagctaatggcgcaacgtttt
aaaaatatttgtgttgttggtgatgctgaccagtctatctacggttggcgtggtgcagat
atgcagaatattcttgactttgaaaaagattatccagatgcaaaagttgttttacttgaa
gaaaattatcgctccacaaaaaccatcttacaggctgccaataatgtgataaacaacaat
gttaatcgtcgtcctaaaaaattatggacccaaaataatgatggggagaatatcctttat
tatcgtgccaacgatgagcgggatgaagcaatctttgcagcttctacgataagtgagcaa
gtgcaagctggacggaaatactctgattttgcagtcctttaccgaacaaatgcacaatca
cgtacgatagaagaagcctttttgaagtctaatattccttatagtatggttgcaggaaca
aagttctactcacgtaaagaaattcgtgatgttatttcttaccttaacgtgattgctaat
ccgcgagataatatgagtttcgagcggatcgtcaatgagcctaaacgtggtgttggtcca
agtgcgctggaaaaattacgaaactttgcggatatgcaagggaagtctttggcagagtcc
acattggatattactttatcggatattcgcggcaaggcagctggcgaaatctacaatctg
gggctgatttttgatttcttgcgtagcttcattgaaagctctagtattacggaacttgtt
gaagaaatgcttgagcgtacgggctatatgaagttcctgcggatgcaagccaatcttgaa
gcgcagacacggattgaaaatattgaggaatttctctctgtgacaaagaattttgatgag
aagtccgaagtgcctctggatgagatgacaggggaacccatcaaagaaacaggattggat
cgtttgagccgtttccttaatgaagtaagtcttctttctgaggttgatgaatacgaagaa
gcgagtgatgcggttaccatgatgaccttgcatgctgccaaaggtttggaatttcctgtt
gtatttcttatcgggatggaagaaaacatcttcccgctttcacgtgttaatgatgatcct
gacgagttggaagaagagcgtcgtcttgcctatgtaggaatcacgcgcgctgaagaattt
ctttatatgaccaatgcaaatcaacgtgtgctctatggtaaaaccagctataatcgtcca
agccgcttcatctccgagattgatgatgagttattggactacggcgggattgcacgcaag
gccaattcaagtttcaatgccagttataaaacagctggaggtggaacactatttgggact
ggcatgtccatgacagatgcgcttcatcaacgtaaagctgcagtcaatcctggagcatca
cgtgtgattgaaaaaacagatgtcgctacagaagattgggcgattggagatactgcagtc
caccgcaaatggggtgaagggattgttttagctgttacagggactggtaaaaacatggag
ttgaaaatcaagttccctgaagtaggcatgaagcgccttttagctgcaatggcaccgatt
gagaaaaaggagtag
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