Lysobacter gummosus: LG3211_3053
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Entry
LG3211_3053 CDS
T04163
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu00020
Citrate cycle (TCA cycle)
lgu00190
Oxidative phosphorylation
lgu00650
Butanoate metabolism
lgu01100
Metabolic pathways
lgu01110
Biosynthesis of secondary metabolites
lgu01120
Microbial metabolism in diverse environments
lgu01200
Carbon metabolism
Module
lgu_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lgu_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lgu_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LG3211_3053 (sdhA)
00650 Butanoate metabolism
LG3211_3053 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LG3211_3053 (sdhA)
Enzymes [BR:
lgu01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LG3211_3053 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
Thi4
GIDA
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ALN92011
LinkDB
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Position
complement(3385693..3387486)
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AA seq
597 aa
AA seq
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MASAYKIQEHKFDMVVVGAGGAGLRATFGLAQKGLKTACITKVFPTRSHTVAAQGGISAA
LGNMGEDDWRYHFFDTVKGSDWLGDQDAIEYMCKEAIPAIIELEHQGVPFSRTDEGKIYQ
RPFGGMTTKYGEGPPAQRTCAAADRTGHAILHTLYQQSLAHDAQFFIEYFALDLIMDETG
ACRGVLALDMAEGTLHLFRAQGTVLATGGYGRAYFSATSAHTCTGDGGGMALRAGLGLQD
MEFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPSVKDLAPRDMVSRSMTI
EIREGRGVGEHKDHILLDLTHLGPEVIHEKLPGIAESARIFANVDVEKEPIPVIPTVHYN
MGGIPTNYHGEVVQLKNGNPDAVVEGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVA
NRCAETITPGGPHAKLPADACDEALARLDKLRNASGSTPTSVIRDKMQRTMQADAAVFRT
GETLSEGVRKMREIHALFADVKVSDRSLIWNSDLIETYELSNLLSQALATIVSAENRTES
RGAHAREDFPTRNDSEWQKHTLCYVDEKGTTSIDYRPVHNYTLTDDVAYVPPKERKY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
gtggcctctgcctacaagattcaagaacacaagttcgacatggtcgtggtcggcgccggc
ggcgccggtttgcgcgcgaccttcggcctggcccagaagggcctgaagaccgcctgcatc
accaaggtgttcccgacccgttcgcacaccgtggccgcgcagggcggcatctccgccgcg
ctgggcaacatgggcgaggacgactggcgttaccacttcttcgacaccgtcaagggttcg
gactggctgggcgaccaggacgcgatcgagtacatgtgcaaggaggccatcccggccatc
atcgagctcgaacaccagggcgtgccgttctcgcgcaccgacgagggcaagatctaccag
cgcccgttcggcggcatgaccaccaagtacggcgaaggcccgccggcgcagcgcacctgc
gccgccgccgaccgcaccggccacgccatcctgcacacgctgtaccagcagtcgctggcg
cacgacgcgcagttcttcatcgaatacttcgctctcgacctgatcatggacgagaccggc
gcctgccgcggcgtgctcgccctggacatggccgaaggcacgctgcacctgttccgcgct
cagggcacggtgctggccaccggcggctacggccgcgcgtacttctccgcgacctcagcc
catacctgcaccggcgacggcggcggcatggcgctgcgcgcgggcctgggcctgcaggac
atggagttcgtgcagttccacccgaccggcatctacggcgccggctgcctgatcaccgaa
ggcgtgcggggcgagggcggcatcctgcgcaacagcaacggcgagcgcttcatggagcgc
tacgcgccgagcgtgaaggacctggcgccgcgcgacatggtcagccgttcgatgaccatc
gaaatccgcgaaggccgcggcgtgggcgagcacaaggaccacatcctgctcgacctgacc
cacctgggtccggaagtcatccacgagaagcttcccggcatcgccgaatcggcgcgcatc
ttcgccaatgtggacgtcgagaaagagccgatcccggtgatcccgaccgtgcactacaac
atgggcggcatcccgaccaactaccacggcgaagtcgtgcagttgaagaacggcaacccc
gacgcggtggtcgaaggcctgtacgcgatcggcgaagcggcctgcgtgtcggtgcacggc
gccaaccgcctgggctcgaactcgctgctcgatctggtcgtgttcggccgcgccgtggcc
aaccgttgcgccgagaccatcacccccggcggcccgcacgccaagttgccggccgacgcc
tgcgacgaagcgctggcgcgcctggacaaactgcgcaacgccagcggcagcaccccgacc
tcggtcatccgcgacaagatgcagcgcaccatgcaggccgacgcggcggtgttccgcacc
ggcgaaacgctgagcgagggcgtgcgcaagatgcgcgagatccacgcgctgttcgccgac
gtcaaggtcagcgaccgttcgttgatctggaactcggacctgatcgagacctacgagctg
tccaacctgctcagccaggcgctggcgacgatcgtctcggccgagaaccgcaccgagtcg
cgcggcgcgcatgcgcgcgaggatttccccacccgcaacgacagcgagtggcagaagcac
acgctgtgctatgtcgacgaaaagggtacgaccagcatcgactaccgtccggtgcacaac
tacaccctgaccgacgacgtggcctacgtgccgcccaaggaacgcaagtactga
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