Lysinibacillus varians: T479_11335
Help
Entry
T479_11335 CDS
T03062
Name
(GenBank) 2-oxoglutarate dehydrogenase E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00020
Citrate cycle (TCA cycle)
lgy00785
Lipoic acid metabolism
lgy01100
Metabolic pathways
lgy01110
Biosynthesis of secondary metabolites
lgy01120
Microbial metabolism in diverse environments
lgy01200
Carbon metabolism
lgy01210
2-Oxocarboxylic acid metabolism
Module
lgy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lgy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
T479_11335
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
T479_11335
Enzymes [BR:
lgy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
T479_11335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
CagS
Motif
Other DBs
NCBI-ProteinID:
AHN21930
UniProt:
A0A806LS86
LinkDB
All DBs
Position
complement(2341359..2344181)
Genome browser
AA seq
940 aa
AA seq
DB search
MSNNVTTVSSPWSAFSGPNLGYVMEQYDLFLQSPEEVEPELVSLFQQFGAPVVVEGDVAV
VSGSAAPAGDYKKVLAAVKLADAIRSQGHLAADIYPLKNRALQTAQIEESAFNLSPADLA
EIPAAIFFKDVPAGVKNGKDAIDYLKSVYTDKIAFEYGHVVVTEERDWIQTQIESGSLKQ
ALSSDEKKALLDRLTRVENFEKFIHKTFVGQKRFSGEGLDTQIVLFDEILKTVEANKVEN
VRIGMAHRGRLNVLTHILNKPYDMMFSDFAHVSNDLFMPEHGRLEITKGWTGDVKYHMGA
SYTRESGMNVKLAYNPSHLEVGNPVVLGSTRATQDETSKPGQAVHNPAKGLGILVHGDAA
FPGQGIVTEVLNYSKTEGFSTGGTIHIIANNMIGFTTELQDSRSSVYSSDPAKGYEVPVV
HVNADSPEAVAQVGRFAANYRQKFGKDIIVDLIGYRRHGHNETDDPTVTNPETYKLVAKH
DTIRTLYGAQLVSEGLVTADEVAALDAAIYAEMQVAYDHVKEMAAKDEHKQIEMPEELKI
EFPQIDTAVGAERLQTINEELLVFEQNFEPQKKLGKILEKRRDAFTSAKIDWGHAETLAY
ATIIQDGTPVRFTGQDAQRGTFSQRHLVLHDKNNGNVFTPLHHISGANASFTVHNSPLTE
AGVVGFEYGYNLEKGNVLSVWEAQFGDFANMAQVMFDNFISGARSKWGQKSGFVILLPHG
YEGQGPEHSSSRMERYLQMSAENNWFVANCSNAGNYYHLLRRQAAMLETEGVRPLVVVSP
KSLLRHPLAAASAEQLADGSFQEVIEQPGLGTKTESVERIVLGTGKVMIDLADRVKDGEG
FDHLHIVRVEQLYPFPTAQVADIIAKYPNVKEIAWVQEEPKNQGAWNYALETLYELSEGK
KLRYVGRPAMSSTSEGDADSHKAAQSAVIEEAVAETVKVK
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacaacgttacaactgtaagttctccatggtcagctttctctggtcctaactta
ggatatgtgatggagcaatacgacttattcttacagtctcctgaagaagtagaaccggag
ttagtatcattattccaacaatttggtgcaccagtcgtagtagaaggtgatgtagctgta
gtaagtggttcagcagctcctgctggcgattataaaaaggtattggcagctgttaaatta
gctgatgcaattcgttcacaaggacatttagcagcagatatttatcctttgaaaaatcgt
gcacttcaaacagcgcaaattgaagaaagtgcgttcaacttaagtcctgcggatttagca
gaaattcctgctgctatcttcttcaaagatgtgccagcgggcgtgaaaaatggtaaggat
gcaattgattatttaaaatctgtttatacagataaaatagcttttgaatatgggcatgtt
gtcgtaactgaagaacgtgattggattcaaactcaaattgaatctggttctttaaaacaa
gcactatcttcagatgagaaaaaagcgttattagaccgtttaacacgtgttgagaacttt
gagaaatttattcacaaaacatttgttggtcaaaaacgtttctcaggtgaaggtttagat
actcaaatcgtcctttttgatgaaattttaaaaacagtagaagcgaacaaagtagaaaat
gttcgtattggtatggcacaccgtggtcgtctaaatgtgctaacacatattttaaataag
ccatatgacatgatgttctctgactttgcacatgtttcaaacgatttatttatgccagag
catggtcgacttgaaattacaaaaggttggactggtgatgtgaagtaccacatgggtgct
tcttatacacgtgaatcaggtatgaatgtcaaactagcgtataacccttcacacttagaa
gttggaaatccggtagtattaggttctactcgtgcaacacaagatgagacatctaagcca
gggcaagctgtgcataacccagcaaaaggactaggtatccttgtgcatggtgacgctgca
ttcccaggtcaagggattgtaacagaagtgttaaactattctaaaactgaaggtttctca
actggtggtacaattcatatcattgcgaacaatatgattggtttcactacggaactacaa
gactcacgttcatctgtttattcttctgacccagcaaaaggttacgaagtaccagttgta
catgtcaatgcagatagcccagaagctgtagcacaagtaggtcgttttgctgctaactat
cgccaaaaattcggtaaagatattattgttgacttaattggttaccgtcgacatggtcac
aatgaaacagatgacccaactgtaacaaatccagaaacatataaacttgttgcaaaacat
gatacaattcgtacattgtatggtgcgcaattagtgtctgaaggcctagttactgctgat
gaagtagcagcacttgatgcagcaatctatgctgaaatgcaagtggcttacgatcatgta
aaagaaatggcagctaaagatgaacataaacagatagagatgccagaagaattaaaaatt
gaatttccacaaattgatacagcagtaggtgctgaacgtttacaaacaataaacgaagaa
cttttagtgtttgaacaaaacttcgagccacaaaagaaattaggtaaaattttagaaaaa
cgtcgcgatgcatttacttctgctaaaattgactggggtcatgctgaaacattagcatac
gcaacaattattcaagatggcacacctgttcgtttcactggtcaagatgcgcaacgtggt
acattctcacaacgtcatttagtgttacatgacaaaaataacggcaatgtatttacacca
cttcaccatatctcaggtgcaaatgcttcatttacagttcacaactctccattaactgaa
gctggagttgtaggctttgaatacggttacaatttagaaaaaggcaatgttttatctgta
tgggaagcacaatttggtgactttgcaaacatggcacaggtgatgtttgataacttcatt
tcaggtgcacgttctaaatggggtcaaaaatcaggctttgtcatccttttaccacatggt
tatgaaggtcaaggtcctgaacactcttcaagtcgtatggaacgttatttacaaatgtca
gcagaaaataactggtttgttgcgaactgctcgaatgcaggtaactactaccacttatta
cgccgtcaagcagcaatgttagaaacagagggtgtacgcccattagttgttgtatcacca
aaatctttacttcgtcatccattagctgcagcaagtgctgagcaattagcagatggttca
ttccaagaagtaattgagcaaccaggattaggtacaaaaacggaatctgttgagcgtatt
gtattaggtactggtaaagtaatgatcgatttagcagaccgcgtgaaagatggagaaggc
ttcgatcacttacacattgtgcgtgtagaacaactttacccattcccaacagcgcaagta
gctgatattattgctaagtatccaaatgtaaaagaaattgcatgggtgcaagaagaacct
aaaaaccaaggtgcttggaattacgcattagaaacattatatgagctatctgaaggtaaa
aagcttcgttatgtaggtcgtcctgcaatgagctcaacttcagaaggcgatgcagattct
cataaagcagctcagtctgctgtcattgaagaagcagtggctgaaacggttaaagttaaa
taa
DBGET
integrated database retrieval system