Lysinibacillus varians: T479_17145
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Entry
T479_17145 CDS
T03062
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00020
Citrate cycle (TCA cycle)
lgy00190
Oxidative phosphorylation
lgy00650
Butanoate metabolism
lgy01100
Metabolic pathways
lgy01110
Biosynthesis of secondary metabolites
lgy01120
Microbial metabolism in diverse environments
lgy01200
Carbon metabolism
Module
lgy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
lgy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lgy_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
T479_17145 (sdhA)
00650 Butanoate metabolism
T479_17145 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
T479_17145 (sdhA)
Enzymes [BR:
lgy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
T479_17145 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
AlaDh_PNT_C
FAD_oxidored
NAD_binding_8
ERM_C
Phage_int_SAM_1
Motif
Other DBs
NCBI-ProteinID:
AHN22813
UniProt:
A0A806LTL1
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Position
complement(3377183..3378937)
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AA seq
584 aa
AA seq
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MAKSKIIVVGGGLAGLMATIKAAEVGTEVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPWIHFDDTVYGGDFLANQPPVKGMCDAAPGIIHLMDRMGVMFNRTPEGLLDFRRFGGTL
MHRTAFSGATTGQQLLYALDEQVRSHEVAGLVNKYEHWEFLGVVIDDDGVCRGIVAQNMR
TEEIQSFRADAVIMATGGPGIIFGKTTNSVINTGSAASIVYQQGASYANGEFIQIHPTAI
PGDDKNRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPHELDVKLGGIIEIYEKFVGDDPRKLPMKIFPAVHYSMGGLWV
DYNQMTEIPGLFAAGECDYSQHGANRLGANSLLSAIYGGMVAGPNAVDYVKHLKKHAEDL
SQDIYDARVKEEQAKWDAIMKMDGTENAYLLHKELGELMTATMTVVRYNDQLEETYKKLG
EFQKRWENININDTQKWSNQGAHFTRQLKNMLYLAKVMTKGALLRNESRGAHYKPDFPQR
DDENFLKTTMAKFDPATGEPVITYQEVDVSLIPPRKRDYSAKGD
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagcaaaataattgttgtcggcggcggtttagctggtctgatggcaacgatt
aaagcagctgaagttggtactgaagttgatttattctcattagttcctgtaaaacgctca
cactctgtatgtgcgcaaggcggaattaatggtgccgtaaatacaaaaggtgaaggggat
tctccttggattcactttgatgatacagtatatggtggggatttcttagcgaaccaacca
ccagttaaaggtatgtgtgatgctgcccctggtattattcacttaatggaccgtatgggt
gtaatgttcaaccgtacaccagaaggtttacttgatttccgccgtttcggtggtacgtta
atgcaccgtacagcattctcaggtgctacaactggtcagcaattactatacgcgttggac
gagcaagttcgttctcacgaagtagctggtttagttaacaaatatgaacactgggaattc
cttggtgttgttatcgatgatgacggcgtttgccgcggtatcgtcgcacaaaatatgcgt
acagaagaaattcaatcattccgtgcagacgctgttattatggcgactggtggccctggt
attatcttcggtaaaacaacaaactctgttattaacacaggttctgctgcttctatcgta
taccaacaaggtgcttcatacgcgaatggtgagttcattcaaatccacccaacagcgatt
cctggggacgacaaaaaccgtctaatgtcagaatctgctcgtggtgaaggtggccgtatt
tggacatataaagacggtaaaccttggtacttcttagaagaaaaataccctgcatatggt
aacttagtaccacgtgatatcgcaacacgtgaaattttcgacgtttgtgtaaaccaaaaa
cttggtatcaacggcgaaaacatggtgtacctagatctttctcataaagatccacatgaa
ttagatgtaaaacttggtggtatcattgaaatctacgaaaaattcgtaggtgatgaccca
cgtaaattaccaatgaaaattttccctgcagttcactactcaatgggtggattatgggtt
gactacaaccaaatgactgaaattcctggtctattcgcagcgggtgaatgcgattactct
caacatggtgcaaaccgtcttggtgctaactcattattatctgcaatttatggcggtatg
gttgctggtccaaatgcagtagattacgttaaacatcttaaaaagcatgctgaagattta
tcgcaagatatttatgatgcacgtgttaaagaagagcaagcgaaatgggatgctatcatg
aaaatggacggcacagaaaacgcttaccttcttcacaaagagcttggtgagttaatgacg
gctacaatgacagttgtacgctataacgaccaacttgaagaaacatataaaaaacttggt
gaattccaaaaacgttgggaaaacattaacatcaacgatacacaaaaatggagtaaccaa
ggtgctcactttacacgtcagctgaaaaacatgctttacctagcgaaagtaatgacaaaa
ggtgctttacttcgtaatgaatctcgtggtgcgcactataaaccagacttcccgcaacgt
gatgatgaaaacttcttaaaaacaacgatggcgaaattcgacccagctacgggcgagcca
gttatcacataccaagaagtagacgtttcattaatcccaccacgtaaacgtgactactct
gcgaaaggagactaa
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