Lysinibacillus varians: T479_20790
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Entry
T479_20790 CDS
T03062
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lgy
Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgy03009
]
T479_20790
Enzymes [BR:
lgy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
T479_20790
Ribosome biogenesis [BR:
lgy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
T479_20790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
MTS
PrmA
Met_10
Methyltransf_15
Cons_hypoth95
TPMT
Methyltransf_11
RrnaAD
Methyltransf_32
Methyltransf_23
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
AHN23390
UniProt:
A0A806LWG6
LinkDB
All DBs
Position
complement(4086477..4087865)
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AA seq
462 aa
AA seq
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MEDVRMSAPVKKNDQLTVYIEDLTHDGNGVAKVEGYPLFIQGALPNETAEVHVLKTLKNY
GFAKVLDILKPSPDRVEAPCDYFKQCGGCQLQHLSYEGQLKWKENMVRNVMQRLGKIDAP
VLPVKGMEEPWQYRNKAQIPFSTNDAGQVIAGFYKTKSHTIVDMDRCLIQTGEADAILSG
LKKELTAIGMQPYNEASHEGMLRHVVIRTARATGEVMVVLVTKKKKFPQKDAAVASIIKL
VPNVTSIMQNINSDKTNVIFGDETINLWGKDIIIDAIGDVRFEISARSFYQVNPQQTEVL
YKQALDYADLQGHERVIDAYCGIGTISLFLAQKAKAVMGVEIVPQAIEDAKRNAELNGFT
NTYFEAGPAEEVIPRWYKEGKEADVLVVDPPRKGCDEALLQTILEQRPKRVVYVSCNPAT
LARDLRILEDGGYKTQEIQPVDMFPHSTHVECVSQLILYKDN
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgtacgaatgtcagcacccgtaaaaaagaatgaccaacttacagtttatata
gaagatttaacacatgatggcaatggtgtcgcaaaagtcgaaggctatccattatttatc
caaggggctttaccgaatgaaacagcagaagtccatgttttaaaaacattaaaaaattat
ggctttgcaaaagtcttggatattttaaagccttcacctgatcgagtagaagcaccttgt
gattatttcaagcaatgtgggggctgtcagttacagcacttatcgtatgaaggtcagtta
aagtggaaggaaaatatggtgcgtaatgttatgcaacgtctaggcaaaatcgacgcaccc
gttttaccagtgaaagggatggaggaaccatggcaatatcgtaataaggcccaaattcca
ttttccacaaatgacgccggtcaagtgattgctggtttttacaaaacaaaatcccatacc
attgtcgatatggatcgctgtctcattcaaacgggcgaggcagacgcaattctttctggt
cttaaaaaagaattaacagctatcggcatgcaaccatacaatgaggcatcacatgaaggc
atgctacgtcacgtcgtaatccgtacagcacgtgcaacaggtgaggtcatggttgtactt
gtgacgaaaaagaaaaaattcccgcaaaaagatgccgctgtagcgagcataataaagcta
gtaccaaatgttacatccattatgcaaaacatcaatagcgataaaacaaacgttattttt
ggtgatgaaacgattaacctttggggcaaagacatcattattgacgctatcggcgatgta
cgctttgaaatttcagcacgttctttctatcaggtaaatccgcagcaaaccgaagtgctt
tacaagcaagcgcttgactatgctgatttacaaggacatgaacgtgtcattgatgcctat
tgcggcatcggtaccatctctttattcctagcacaaaaagcaaaagcggtgatgggtgtt
gaaatcgtaccccaagccattgaagatgcaaaacgcaatgcagagctgaacggctttacc
aatacgtacttcgaggcaggcccagcagaggaagtcattccacgctggtataaggaaggc
aaggaagcggatgtcctagttgtcgacccaccacgtaaaggatgcgacgaagccctttta
caaacgattttagagcagcgtcctaaacgcgtagtatacgtatcatgtaacccagccaca
ctcgcacgcgacctacgcatcttggaagatggcggatacaaaacacaagaaatacaacca
gttgatatgttcccgcactctacacatgtggagtgtgtctcgcaactcattttatacaaa
gacaactaa
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