Laribacter hongkongensis: LHK_01821
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Entry
LHK_01821 CDS
T00884
Symbol
trmU
Name
(GenBank) TrmU
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
lhk
Laribacter hongkongensis
Pathway
lhk04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
lhk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
LHK_01821 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhk03016
]
LHK_01821 (trmU)
Enzymes [BR:
lhk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
LHK_01821 (trmU)
Transfer RNA biogenesis [BR:
lhk03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
LHK_01821 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
QueC
Asn_synthase
Arginosuc_synth
ATP_bind_3
DEDD_Tnp_IS110
Motif
Other DBs
NCBI-ProteinID:
ACO74805
UniProt:
C1D8L5
LinkDB
All DBs
Position
complement(1730221..1731300)
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AA seq
359 aa
AA seq
DB search
MTEKKKRIVVGLSGGVDSSVTAYLLKQQGHEVIGVFMQNWEDDNDSEYCSIKQDSLDAMS
VADLLGIDMEIVNFAREYKERVFQYFLDEYSAGRTPNPDVLCNAEIKFKAFLDYAMQLGA
DCIATGHYARKLERDGRHYLLKGVDPGKDQSYFLYRLVPAQLEKALFPLGDLHKTEVRRI
AGEIGLPNARKKDSTGICFIGERPFRAFLQRYLPMHPGAMVTPEGRVVGQHEGLMYYTLG
QRKGLNIGGSKDGNGEPWFVAGKDIPRNELIVVQGHDHPLLLKPVLEAEQLSWTLGAAPD
DGAYAAKNRYRMPDAACELTNLSSGRIRLAFADSQWSVTPGQSAVLYDGDVCLGGGVIV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgacggagaagaaaaaacgcatcgtagtcggcttgtcgggcggggtggactcgtcggtg
acagcctatctgctcaagcagcaaggtcacgaagtgatcggcgtgttcatgcagaactgg
gaagacgacaacgacagcgaatattgctcgatcaagcaggattcccttgatgccatgagt
gttgccgacctgctcggcattgacatggagatcgtcaactttgccagggaatacaaggaa
cgggtgttccagtattttctggacgaatactcggctggccgcacacccaatccggacgtg
ctgtgcaatgccgaaatcaagttcaaggccttccttgattacgccatgcagctgggtgcc
gactgcattgctaccggtcattacgcacgcaagcttgaacgcgatggccgccactatttg
ctcaagggcgttgatccgggcaaggaccagagttacttcctgtaccggctggtgccggcc
cagctcgagaaagccctgtttccgctgggcgacctgcacaagaccgaagtgcggcgcatt
gccggcgagatcggtttgcccaatgccaggaaaaaggattcgacgggaatctgctttatc
ggcgaacgcccgttcagggctttcttgcagcgttacctgccgatgcaccccggcgccatg
gtgacgccggaggggcgtgtggtcggacagcacgaggggctgatgtattacacccttggg
cagcgcaagggcctgaacatcggtggcagcaaggatggcaacggcgagccttggtttgtg
gcaggcaaggacattccccgcaatgaactgatcgtggtgcagggacacgaccatcctctg
ctgctgaaaccggtgctggaggccgaacagctctcgtggacgctgggtgctgctccggat
gacggtgcatatgcagccaagaaccgctatcgcatgccggatgctgcctgcgaattgacg
aatctgtcatccgggcgcattcgtctggcctttgccgacagccagtggtccgtgactccc
gggcagtcagcggtgctgtatgacggcgatgtctgcctcggtggtggcgtgatcgtttga
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