KEGG   Paucilactobacillus hokkaidonensis: LOOC260_106260
Entry
LOOC260_106260    CDS       T03598                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
lho  Paucilactobacillus hokkaidonensis
Brite
KEGG Orthology (KO) [BR:lho00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lho03009]
    LOOC260_106260
Enzymes [BR:lho01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     LOOC260_106260
Ribosome biogenesis [BR:lho03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    LOOC260_106260
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Met_10 PrmA TRAM Methyltransf_25 MTS Methyltransf_15 Cons_hypoth95 N6_N4_Mtase Methyltransf_11 RrnaAD Methyltransf_32 DOT1 Methyltransf_12 Ubie_methyltran Methyltransf_4 UPF0020 TPMT CMAS Methyltransf_23 ENCP4 DUF6567 Methyltransf_24
Other DBs
NCBI-ProteinID: BAP85183
UniProt: A0A0A1GWH8
LinkDB
Position
645113..646477
AA seq 454 aa
MKLNTPVHKNESLEGTVMDLTYQGMGVVKVDNFPVFIPNALPGEEISYGVTKVTKNFAFG
RVVDWKKKSEDRVEVKNQQFTQTGIAPLQHLAYPAQLKFKQHQISELLQKTHLDIEVLPT
LGMEKPYHYRNKAQVPARMIHGKVETGFYKRGSHQLVPIEDFFIQDPKIDAAIIVVRDLL
RKFHIEPYNEETNKGVIKTVMVRRGYYSHEMMIVLVTKTKKLPMVQELIDGMTSQLPEVV
SIVQNVNSAKTNVLLGDKNFTIYGKPTIDDQLMGINFTISPNSFYQVNPQQTEKLYQRAI
EQAELTGNETVIDAYCGIGTISLAVAQHAAEVYGVEIVEDAVEDAKHNAKRNKIANAHFV
VGKAEEQMAKWQEDGLEPDVIMVDPPRKGLAPEFIEAAAEMQPKKVVYVSCNPATLVRDI
ELFATQGYTVKQPIQPVDQFPQTTHIESITVLSR
NT seq 1365 nt   +upstreamnt  +downstreamnt
atgaaactcaatacaccagttcacaagaatgaatcacttgaaggtaccgtgatggattta
acttatcaggggatgggcgttgtcaaagttgataactttcctgtctttattcctaatgcg
ctccctggcgaagaaattagttatggcgttactaaagtaactaaaaattttgccttcggt
cgggtcgtcgattggaaaaagaaaagtgaagatcgcgttgaggttaaaaatcaacagttc
acccaaactggaattgcgcctttacagcatttagcttacccagcgcaattaaagtttaag
caacatcaaatttcagaactattgcaaaaaacacatttagatattgaagtgttgccaact
ttaggaatggaaaaaccatatcattatcgcaataaggcccaagtgccggcacggatgatt
catggtaaggtcgaaactggattttacaaacgtggtagtcatcaattagtgccaattgag
gatttctttattcaggatcccaaaattgatgcagccattattgtggttcgtgatttacta
agaaaattccatattgaaccatacaacgaagagaccaataagggtgttattaaaaccgtg
atggttcgtcgtggttattatagtcatgaaatgatgattgttttagtgactaaaacaaag
aaattaccaatggtccaagaattaattgatggaatgacatctcaattaccagaagtggtt
agtattgtgcaaaatgtgaattcggctaagaccaacgtgttattgggtgacaaaaacttc
actatttatggcaagccaacgattgatgatcagctgatggggattaactttaccatttca
ccaaactcattttatcaagttaacccacaacaaactgaaaaactgtatcaacgtgcgatc
gagcaagctgaattaactggtaatgaaacagtgatcgatgcatattgtgggatcggaaca
atttcactagcagttgctcagcacgctgctgaagtgtacggtgttgaaattgttgaagac
gctgtagaagatgccaagcacaatgccaagcgtaataagattgctaacgctcactttgta
gtgggtaaggctgaagaacagatggctaagtggcaagaagatgggctagaacctgacgtc
atcatggttgatccgccacgtaaaggattggcaccagaatttattgaagcagctgctgaa
atgcaacctaagaaggtagtgtatgttagctgtaacccagcaacgttagtgcgggatatc
gaattgtttgcaacacaggggtataccgttaaacaaccaattcaaccggttgatcaattt
ccgcaaactacccatattgaaagtattacggtgttaagtcggtaa

DBGET integrated database retrieval system