Paucilactobacillus hokkaidonensis: LOOC260_106260
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Entry
LOOC260_106260 CDS
T03598
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
lho
Paucilactobacillus hokkaidonensis
Brite
KEGG Orthology (KO) [BR:
lho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lho03009
]
LOOC260_106260
Enzymes [BR:
lho01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LOOC260_106260
Ribosome biogenesis [BR:
lho03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LOOC260_106260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Met_10
PrmA
TRAM
Methyltransf_25
MTS
Methyltransf_15
Cons_hypoth95
N6_N4_Mtase
Methyltransf_11
RrnaAD
Methyltransf_32
DOT1
Methyltransf_12
Ubie_methyltran
Methyltransf_4
UPF0020
TPMT
CMAS
Methyltransf_23
ENCP4
DUF6567
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
BAP85183
UniProt:
A0A0A1GWH8
LinkDB
All DBs
Position
645113..646477
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AA seq
454 aa
AA seq
DB search
MKLNTPVHKNESLEGTVMDLTYQGMGVVKVDNFPVFIPNALPGEEISYGVTKVTKNFAFG
RVVDWKKKSEDRVEVKNQQFTQTGIAPLQHLAYPAQLKFKQHQISELLQKTHLDIEVLPT
LGMEKPYHYRNKAQVPARMIHGKVETGFYKRGSHQLVPIEDFFIQDPKIDAAIIVVRDLL
RKFHIEPYNEETNKGVIKTVMVRRGYYSHEMMIVLVTKTKKLPMVQELIDGMTSQLPEVV
SIVQNVNSAKTNVLLGDKNFTIYGKPTIDDQLMGINFTISPNSFYQVNPQQTEKLYQRAI
EQAELTGNETVIDAYCGIGTISLAVAQHAAEVYGVEIVEDAVEDAKHNAKRNKIANAHFV
VGKAEEQMAKWQEDGLEPDVIMVDPPRKGLAPEFIEAAAEMQPKKVVYVSCNPATLVRDI
ELFATQGYTVKQPIQPVDQFPQTTHIESITVLSR
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaatacaccagttcacaagaatgaatcacttgaaggtaccgtgatggattta
acttatcaggggatgggcgttgtcaaagttgataactttcctgtctttattcctaatgcg
ctccctggcgaagaaattagttatggcgttactaaagtaactaaaaattttgccttcggt
cgggtcgtcgattggaaaaagaaaagtgaagatcgcgttgaggttaaaaatcaacagttc
acccaaactggaattgcgcctttacagcatttagcttacccagcgcaattaaagtttaag
caacatcaaatttcagaactattgcaaaaaacacatttagatattgaagtgttgccaact
ttaggaatggaaaaaccatatcattatcgcaataaggcccaagtgccggcacggatgatt
catggtaaggtcgaaactggattttacaaacgtggtagtcatcaattagtgccaattgag
gatttctttattcaggatcccaaaattgatgcagccattattgtggttcgtgatttacta
agaaaattccatattgaaccatacaacgaagagaccaataagggtgttattaaaaccgtg
atggttcgtcgtggttattatagtcatgaaatgatgattgttttagtgactaaaacaaag
aaattaccaatggtccaagaattaattgatggaatgacatctcaattaccagaagtggtt
agtattgtgcaaaatgtgaattcggctaagaccaacgtgttattgggtgacaaaaacttc
actatttatggcaagccaacgattgatgatcagctgatggggattaactttaccatttca
ccaaactcattttatcaagttaacccacaacaaactgaaaaactgtatcaacgtgcgatc
gagcaagctgaattaactggtaatgaaacagtgatcgatgcatattgtgggatcggaaca
atttcactagcagttgctcagcacgctgctgaagtgtacggtgttgaaattgttgaagac
gctgtagaagatgccaagcacaatgccaagcgtaataagattgctaacgctcactttgta
gtgggtaaggctgaagaacagatggctaagtggcaagaagatgggctagaacctgacgtc
atcatggttgatccgccacgtaaaggattggcaccagaatttattgaagcagctgctgaa
atgcaacctaagaaggtagtgtatgttagctgtaacccagcaacgttagtgcgggatatc
gaattgtttgcaacacaggggtataccgttaaacaaccaattcaaccggttgatcaattt
ccgcaaactacccatattgaaagtattacggtgttaagtcggtaa
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