Lactobacillus helveticus R0052: R0052_01745
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Entry
R0052_01745 CDS
T02217
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lhr
Lactobacillus helveticus R0052
Pathway
lhr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R0052_01745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhr03021
]
R0052_01745
03400 DNA repair and recombination proteins [BR:
lhr03400
]
R0052_01745
Enzymes [BR:
lhr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R0052_01745
Transcription machinery [BR:
lhr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R0052_01745
DNA repair and recombination proteins [BR:
lhr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R0052_01745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AFR21355
LinkDB
All DBs
Position
311894..312832
Genome browser
AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVEQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDGVL
HEFSTVPGVREDVTKIILNLKKLELKSFSDERKVIELDVEGPATVTADDLKVDADVQVLN
PDQYICTIAEGGHLHMEIAVQNGRGYVAASDNKSDDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDKLTFEIWTDGSIKPNDALSFAAKILVEHFKVFESADADTKFSEVMVEKED
DKKEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDMTESDMMRVRNLGRKSLEEVKNK
LTDLGLSLRQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgttgttgaacaagaagattcttacggtaag
tttgttgttgaaccacttgagcgaggctttggtactactttaggtaactctttaagaaga
gtcttacttacttctattcctggtactggacttgtttatgtgcaaattgatggcgtttta
cacgagttctcaacagttcctggcgtcagagaagatgtaaccaagattattcttaatttg
aagaagcttgaattaaagtctttttcagatgaaagaaaggttattgaattggacgttgaa
ggtcctgccacagtaactgctgatgatcttaaagttgatgcagacgttcaagtcttaaat
ccggatcaatacatttgtaccattgctgaaggtggacacttgcacatggaaatcgccgta
caaaatggtagaggttatgttgctgcaagtgacaataagagtgatgacatgccaattgga
gtaattcctgttgattctctattctcaccaattaaaaaggttaactaccaagttgaatca
actcgtgttggtaagagagacgattttgacaagctcacttttgagatttggactgacggt
tcaatcaagcctaatgacgcccttagttttgctgctaagattttagttgaacatttcaaa
gtatttgaatcagctgatgcagatactaaattcagcgaagtaatggtggaaaaggaagac
gacaagaaagaaaagaaactcgaaatgacaattgaagagcttgatctttctgttcgttca
tacaactgcctgaaacgtgccggcattaacactcttcaagagttaactgatatgacagag
tcagatatgatgcgtgtacgtaacttgggacgtaaatcattggaagaagttaagaataaa
ttaaccgacttaggtctttcacttcgtcaggaagactaa
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