KEGG   Linepithema humile (Argentine ant): 105670581Help
Entry
105670581         CDS       T04898                                 

Definition
(RefSeq) histone deacetylase 6 isoform X1
  KO
K11407  
histone deacetylase 6 [EC:3.5.1.98]
Organism
lhu  Linepithema humile (Argentine ant)
Brite
Enzymes [BR:lhu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105670581
Protein phosphatases and associated proteins [BR:lhu01009]
 Protein Ser/ Thr phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     105670581
Messenger RNA biogenesis [BR:lhu03019]
 Eukaryotic Type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     105670581
Membrane trafficking [BR:lhu04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    105670581
Chromosome [BR:lhu03036]
 Eukaryotic Type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class II HDACs
     105670581
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
LinkDB All DBs
Position
Unknown
AA seq 1170 aa AA seqDB search
MAESAVSSDLFTAAKQLADSEIELIKTIENSSACQRSVTNMFASVKKTKKSGKSRNVRPS
AALLAAKRQAAQRQLLEKKSSNNFVMDIYQRALDTYKMMRKETGLVFDRSMAEHECLWDP
NYSECPARFTRVLQRCEDLGLVQRCKLIEPRMATESEILTKHSQKQIDILKATDGCADSE
NLELLSSKYDCVFVHPSTYKLSLLAAGSAINLVESICKGEVQNGMAIVRPPGHHAMESEY
CGYCFFNNVAIAATAALNSNLASRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHGE
FWPNLRESDFHYVGENLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPNLVIVS
AGYDAALGCPEGEMLVTPACYAHLLSSLLSLAAGKVAVILEGGYCLKSLAEGAALTLRTL
LGDPCPILQTLDLPSSSIRDTILNVIYAHRPYWKCYQYQDTHSVNSVTHNKEEIANRHVI
IVTYKGSEVKPDKYDTRNCYPVQSTEVFDAMDKKLNDLILFTNLRKAPHKVCIVYDDKMQ
KHCDISDNTHPEKPVRISSIYKSHEEHGLLERCYLLQGRSATMEELCLVHSKDYIDSIKR
TSTLKLKELQKQASDYNSVYLHPDTWSSACISAGSLLQVVDAVLNGESQSGVAIIRPPGH
HAEEDTACGFCIFNNVAVAATYAVQFHHLKRVLIVDWDVHHGNGTQSIFEEDPKVLYISV
HRYDNGSFFPNSKAANYTSVGLNAGERFNVNIPWNKKGMGDAEYIAAFQQVVMPIAYQFN
PELVLISAGFDACIGDPLGGCQVSPELYGHLTHWLSSLANGRVILSLEGGYNINSISHAM
TMCTKSLLGDPLPVLDPGLIPCTSAINSINNVLKTHKRFWPNLQYGMSLPKENILPKLKT
ANKLEEQGRNVEKQKRTESKIALEVIESEKLELNLAIDKNCLNLVTDEEILKLTNEVENI
KIKNSELDAGRSEAGEITRSSRKSEAKSLDVSQSIQQCVNESNQPRSSQQRSSSTHESRD
DEGAASLQPETRSTLMEYLSDNLQALTAGEMFAVMPLRDCPHLFTVNEVPSGGIDVTAPC
MECVSTAENWICLQCYTVHCARNVNQHAMQHAEECEHPITLSFSDISVWCYGCEAYIDNP
RLYAARNAAHQSKFNEELPWTYSETSVNVS
NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt
atggctgaatctgcagtgagctcagatttatttactgctgccaaacagttagcagacagc
gagattgagcttataaagacaattgaaaattctagcgcatgccaaagaagtgttacaaat
atgtttgcaagtgtaaagaaaacaaaaaaatctgggaaatcaagaaatgttcgtccgtca
gccgcgctattggctgctaaacgacaggcggcgcagcgacagttgttagagaagaaatcc
agtaataacttcgtaatggacatataccagagagcactcgatacgtacaaaatgatgcga
aaggaaactggcctcgtgtttgatcgaagcatggcagaacacgaatgcctttgggatcct
aattattccgagtgcccagccagatttacgcgagtcttgcagagatgcgaagatttgggc
ctggtgcagcgatgtaagcttatcgagccaagaatggccacagaaagtgagatcttgacg
aagcacagtcaaaagcaaattgacattctgaaagcgaccgatggctgtgcggattctgag
aacttggagttgctgtcctccaaatatgattgtgtttttgttcatccgtctacgtacaaa
ttatctttactggctgcgggctcggcgatcaatttggtagaaagtatttgtaaaggcgaa
gtgcaaaatggcatggctatcgtcaggccaccaggtcatcatgcaatggaatcggagtac
tgcggttattgcttcttcaacaatgtagctattgcagcgacggcagctttgaattctaat
ttggcgagtagaattttaattgtggattgggatgttcatcacggacaagcgacgcaacaa
atgttttacaatgatccacgtgtagtctatttttcgatacatcgttatgaacatggcgaa
ttctggcctaatctgagggaatctgactttcattacgttggagagaatctcggagagggt
tacaattttaatataccattaaataaaactggaatgacgaacgctgattacatagcaatt
ttccaacaagttttattgccaatggcttacgaatttcaaccgaatttggtaattgtgtca
gctggttatgatgcggctctgggttgtccagagggtgagatgctggtaactccagcgtgt
tatgcgcatttactgtcgtcactattgagtctggcagctggaaaagtcgccgtgatttta
gagggtggttattgcctgaaatctttagcagaaggtgcagctttgaccctaagaacttta
ttgggcgatccgtgtcccattttacaaacactcgatttaccatcatcaagtatacgggac
actattttgaacgtgatctatgcacacagaccgtactggaagtgttatcagtatcaagat
acgcatagtgtcaatagtgtaactcacaacaaagaggagattgccaatcgacatgtaatt
atagtcacgtacaaaggcagtgaagttaaaccagacaaatacgacactcgaaattgctat
cctgtacagagcacggaggttttcgatgccatggacaaaaagttgaacgacctgatacta
tttacaaacttgcgcaaagcgccgcataaagtgtgcattgtctacgatgataaaatgcag
aagcattgcgacatttctgacaacacacatccagagaaaccagttcgcatctccagcatt
tataagagtcatgaagagcatggcttgctggaacgatgttatttgctacaaggaagaagc
gcaacaatggaagaattgtgcttggttcattcgaaggattacatcgacagtatcaagaga
acatcaactttaaaactcaaggagttacagaaacaagcatcggactacaattccgtgtat
cttcaccctgatacgtggtcgagcgcttgcatatctgctggctctcttttgcaagtggtg
gacgcagttttgaatggggaaagtcaatccggagtggccatcataaggccgcctggtcac
catgccgaagaagacactgcgtgtggattttgtattttcaataacgtggcggtggctgca
acttacgctgtacaatttcatcatctaaagagggtactgatagtagactgggacgtgcat
cacggaaacgggacgcaatctatattcgaggaagacccgaaagttctttacatctccgtt
catcgttacgacaacggcagcttctttccgaactcgaaagcggccaattacacgagcgtc
ggtttaaacgcgggcgaaagattcaacgtaaacataccgtggaacaagaaaggaatggga
gatgcggaatatatagctgctttccagcaagtcgtgatgcccatcgcttatcaatttaat
ccagagctagtcttgatttctgctggattcgatgcttgcataggcgatccactcggaggc
tgccaagtgagtccggagctctacggccatttaactcactggctctcatctctggctaac
ggtcgcgtaatcctcagtcttgagggaggctataacatcaattccatctcccacgctatg
accatgtgcaccaagagtctgctgggcgatcctctgcctgtgctggatcctggtctgatc
ccctgcactagtgcaatcaattccattaacaacgtgctgaagactcataagagattctgg
cccaatctgcaatatggaatgtccttgccgaaagaaaatatacttcccaaacttaagaca
gccaataaacttgaagagcaaggaagaaacgtggagaagcagaaacgcaccgaatcgaag
atcgctttggaagtaatcgaaagtgagaaactggagttgaatttggcgatcgataagaac
tgtttgaatctcgtgacggacgaggagattttgaagctgacgaacgaagtggagaacatt
aaaattaagaattccgaactggacgcggggagaagtgaagcgggcgagatcacgaggagt
tcgagaaagagcgaggcgaaaagtttggacgtttcacagagtatacaacaatgcgtaaac
gagtcgaaccagccgagaagcagccagcaaagaagttccagcacacacgagagccgcgat
gacgagggtgcggcatctctgcaacctgaaacgcgttctaccctcatggaatatctctct
gacaatcttcaggcactgacggcaggggaaatgttcgcagtgatgcccttgcgagactgt
ccgcacttatttacagtcaatgaggttccttcgggcggaatcgacgtgactgctccgtgc
atggaatgcgtcagtaccgcggagaattggatctgcttacagtgttacactgtgcactgc
gctcgtaatgttaatcagcacgccatgcaacatgcggaggagtgtgaacatcccattaca
ctcagcttcagcgatatttctgtctggtgctacggttgtgaggcgtacatcgataatcct
cgattgtacgctgcaagaaacgcggctcatcaaagcaagttcaatgaggagcttccttgg
acttatagcgaaactagcgtaaacgtatcttaa

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