Leishmania infantum: LINJ_33_0420
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Entry
LINJ_33_0420 CDS
T01112
Name
(RefSeq) MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
lif
Leishmania infantum
Pathway
lif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LINJ_33_0420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lif03400
]
LINJ_33_0420
DNA repair and recombination proteins [BR:
lif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LINJ_33_0420
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_29
MutS_II
MnmE_helical
Motif
Other DBs
NCBI-GeneID:
5072195
NCBI-ProteinID:
XP_001468124
UniProt:
A4I8Q5
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Position
33:complement(136205..139024)
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AA seq
939 aa
AA seq
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MTDERDGGVVQAFLALGADSSQCFRMFSRGSNPGCYVLGWWATLVAKEYIKSTAVLKKWS
SGNSSSAMVDVVVVNDALCKEIIRDCLLRRGVSVEYYERETAGGSYVCRQRGSPGNITDF
EASLFEVEEAEIQLLASGSLVFGATQDTGTAIGFAALNNTLRQLTFAEYTDTPQLTSLDA
LVAQTNLKELLLCVMSPAASAGAEATFSDDDRITAVRRICERCGVQLSVRSLREIQQLQK
EEAAAKGLEALAEILRVPEERLSLELCPIARQAVENILGRIDVMDPSNRRAFYLRRTVPS
TYMKLDSAAIEALNLVSKKPEPRGTLPTSVFSWLNRCHTGMGARAMRQWLLQPLRCAEDI
NQRLTMVELFVENPILRDMFTTQVLKRCGDMDRLNRKLQRRSLALKDTQAFLEFVNVVPA
ALQVLGTYTGPQSKLLKDEYIAPMEDINDHMANLKTLIEATVDFSDRNAVRMNAAFDDEL
QALHEQLTSTQRQIDKEYGRVLSKYGWNEKQLKHEYHGTYGYVFRVSRKEDRQLRSTKEL
ITVSTSKDGVRFVSEKMAALSEQYRRISDDYETRQMDLKRKLVDTIASYLPVLDDAKELI
ATLDVFVAWALVVKDCPRPMVRPAVREAPGTVALVKQEGTSARGADAAPLLSFKRLRHPL
VELRQPGYKANPLHLTTQTNGLLITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQ
VRDAVMCRVGATDHLAQGVSTFMVEMLESASILTGATQDTLAIIDELGRGTSTYDGFGLA
WAIAQDVAVRVRATLLFSTHFHELTQLPQQCSALQNMHFGAEVDESAGTLRFSYTLQPGP
CGRSYGLYVASLAHLPESVIACAKVKVAEWETFEKEGASKSSAGAALDEAVVRKVSAYAK
RIRELEQQGPGDDHDAAVQRLKLEIRQDADVRPYLCEVA
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgagcgcgacggtggtgttgtgcaggcctttctggcccttggcgccgactcc
agccaatgctttcgcatgttttccagaggctccaacccgggatgttacgtgctgggctgg
tgggccaccctcgtcgcgaaagagtacatcaagtccactgccgtgctgaagaagtggtcg
agcggcaactcgtcctccgccatggtggacgttgttgttgtgaatgacgcactctgcaag
gagatcatccgcgattgcttgctgcgccgtggggtgtcggtggagtactacgagcgagag
acggccggcgggtcgtacgtgtgccgccagcgcggctcgccagggaatatcaccgacttt
gaggcatcgctcttcgaggttgaggaggcggagattcaactgctggcgagcggctccctc
gtgttcggtgcaacgcaggacacggggacagcgattggctttgcggcgctgaataacact
ctgcggcagttgacctttgccgagtacacggacacgccgcagctcaccagcctggacgcg
cttgtcgcgcagacgaacttgaaggagcttttgttgtgtgtgatgtcacccgccgcgtcc
gctggcgccgaagccaccttcagcgacgatgaccgaatcaccgcggtgcgccgtatatgt
gagcggtgcggcgttcagctgagcgtgcgctcgctgcgcgagattcagcagctgcagaag
gaggaagccgctgcaaaaggcctcgaggcactggcagagatcctgcgagtgccagaggag
cgtctgtcgctagagctctgcccgattgcgcgacaagccgtggagaacattctcggccgc
attgatgtcatggacccgtcgaatcggcgcgccttctacctgcgccgcaccgttccgtcc
acgtatatgaagctggacagcgcggcgatcgaggcgctgaacctggtgagcaagaagccg
gagccgcgcggcacccttccgacgtctgtgttctcgtggctgaaccgctgtcacactggc
atgggcgcgcgtgcgatgcggcagtggctgctgcagccgctccgctgcgccgaagatatc
aaccagcgcctcacaatggtggaactcttcgtggagaaccccattctacgcgacatgttc
acgacccaggtgctgaagcggtgcggcgacatggatcgacttaaccgcaaactgcagcgt
cgcagcctcgccctgaaggacacgcaggcgttcctggaatttgtgaatgtcgtccctgct
gctctacaggttctgggtacctacacaggcccgcagtcgaagctcttgaaagatgagtac
attgccccgatggaggatatcaacgaccatatggcgaacctgaagacgctgatcgaggca
acggtggacttcagtgaccgcaatgcggtccgcatgaacgccgcgttcgacgacgagctt
caggccctgcatgagcagctcacgagcacgcagcggcagatcgacaaggagtacggccgc
gtcctgagcaagtacgggtggaatgagaagcagctcaagcacgagtaccacggtacgtat
ggctacgtctttcgtgtctcgcgcaaggaggatcgccagctgcgcagcacaaaggaactt
atcacggtaagcacgtccaaggacggcgtacggtttgtgtcagagaagatggcggccctc
agcgagcagtaccggcgcatcagcgacgactacgagacacggcagatggacctcaagcgc
aagcttgtggacaccatcgcctcctacctgcccgtgctcgacgatgccaaggagctgata
gcgaccctggacgtcttcgtggcctgggctctcgtggtgaaggattgcccgcgtcccatg
gtgcggccagctgtacgcgaggcccctggcactgtggcgttggtgaagcaggagggaaca
agcgcacgcggcgcagacgcagcgccgctcctctccttcaagcggctccgtcatcctttg
gtagagcttcgccagccgggctacaaggccaaccctctccatctcaccacgcaaacaaac
ggactgctcattaccggacccaacatgggcggcaagtccacgtacatgcgcagcgtcggt
gtcgcggtggtgctggcgcaagcgggctgctttgtaccggccgatgcggcggaggttcag
gtgcgcgacgctgtcatgtgccgagtcggcgcgaccgatcacttggcacagggcgtctct
acgtttatggtggagatgctcgagtctgcctcgattctcacaggcgcgacgcaggatacc
ctcgccatcatcgacgagctcggccgcggtacgtccacgtacgacggcttcgggttggcg
tgggcgattgcccaggacgtggcggtgcgtgttcgcgcgaccctgttgttctccacacat
tttcacgagctgacgcagctgccgcagcagtgcagcgctctgcagaacatgcactttggc
gccgaggtcgacgagtcggccggaacgctgcgcttctcctacactctccagccaggcccg
tgcggacgcagttacggcctgtacgtcgcgtcgttggcgcacctgccagagtccgtgatt
gcgtgcgccaaggtgaaagttgcggagtgggagacatttgaaaaagagggcgcctccaag
agcagtgctggagcggcgctcgacgaggcggtggtgcggaaggtttcggcgtacgccaag
cgcatccgtgagctggaacagcagggaccgggcgacgatcacgacgcggcggtgcagcgg
ctaaagttagagatccggcaggacgcagatgtccgcccgtatctgtgcgaggtggcgtag
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