KEGG   Leishmania infantum: LINJ_33_0420
Entry
LINJ_33_0420      CDS       T01112                                 
Name
(RefSeq) MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
lif  Leishmania infantum
Pathway
lif03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lif00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    LINJ_33_0420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lif03400]
    LINJ_33_0420
DNA repair and recombination proteins [BR:lif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     LINJ_33_0420
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV AAA_29 MutS_II MnmE_helical
Other DBs
NCBI-GeneID: 5072195
NCBI-ProteinID: XP_001468124
UniProt: A4I8Q5
LinkDB
Position
33:complement(136205..139024)
AA seq 939 aa
MTDERDGGVVQAFLALGADSSQCFRMFSRGSNPGCYVLGWWATLVAKEYIKSTAVLKKWS
SGNSSSAMVDVVVVNDALCKEIIRDCLLRRGVSVEYYERETAGGSYVCRQRGSPGNITDF
EASLFEVEEAEIQLLASGSLVFGATQDTGTAIGFAALNNTLRQLTFAEYTDTPQLTSLDA
LVAQTNLKELLLCVMSPAASAGAEATFSDDDRITAVRRICERCGVQLSVRSLREIQQLQK
EEAAAKGLEALAEILRVPEERLSLELCPIARQAVENILGRIDVMDPSNRRAFYLRRTVPS
TYMKLDSAAIEALNLVSKKPEPRGTLPTSVFSWLNRCHTGMGARAMRQWLLQPLRCAEDI
NQRLTMVELFVENPILRDMFTTQVLKRCGDMDRLNRKLQRRSLALKDTQAFLEFVNVVPA
ALQVLGTYTGPQSKLLKDEYIAPMEDINDHMANLKTLIEATVDFSDRNAVRMNAAFDDEL
QALHEQLTSTQRQIDKEYGRVLSKYGWNEKQLKHEYHGTYGYVFRVSRKEDRQLRSTKEL
ITVSTSKDGVRFVSEKMAALSEQYRRISDDYETRQMDLKRKLVDTIASYLPVLDDAKELI
ATLDVFVAWALVVKDCPRPMVRPAVREAPGTVALVKQEGTSARGADAAPLLSFKRLRHPL
VELRQPGYKANPLHLTTQTNGLLITGPNMGGKSTYMRSVGVAVVLAQAGCFVPADAAEVQ
VRDAVMCRVGATDHLAQGVSTFMVEMLESASILTGATQDTLAIIDELGRGTSTYDGFGLA
WAIAQDVAVRVRATLLFSTHFHELTQLPQQCSALQNMHFGAEVDESAGTLRFSYTLQPGP
CGRSYGLYVASLAHLPESVIACAKVKVAEWETFEKEGASKSSAGAALDEAVVRKVSAYAK
RIRELEQQGPGDDHDAAVQRLKLEIRQDADVRPYLCEVA
NT seq 2820 nt   +upstreamnt  +downstreamnt
atgacggacgagcgcgacggtggtgttgtgcaggcctttctggcccttggcgccgactcc
agccaatgctttcgcatgttttccagaggctccaacccgggatgttacgtgctgggctgg
tgggccaccctcgtcgcgaaagagtacatcaagtccactgccgtgctgaagaagtggtcg
agcggcaactcgtcctccgccatggtggacgttgttgttgtgaatgacgcactctgcaag
gagatcatccgcgattgcttgctgcgccgtggggtgtcggtggagtactacgagcgagag
acggccggcgggtcgtacgtgtgccgccagcgcggctcgccagggaatatcaccgacttt
gaggcatcgctcttcgaggttgaggaggcggagattcaactgctggcgagcggctccctc
gtgttcggtgcaacgcaggacacggggacagcgattggctttgcggcgctgaataacact
ctgcggcagttgacctttgccgagtacacggacacgccgcagctcaccagcctggacgcg
cttgtcgcgcagacgaacttgaaggagcttttgttgtgtgtgatgtcacccgccgcgtcc
gctggcgccgaagccaccttcagcgacgatgaccgaatcaccgcggtgcgccgtatatgt
gagcggtgcggcgttcagctgagcgtgcgctcgctgcgcgagattcagcagctgcagaag
gaggaagccgctgcaaaaggcctcgaggcactggcagagatcctgcgagtgccagaggag
cgtctgtcgctagagctctgcccgattgcgcgacaagccgtggagaacattctcggccgc
attgatgtcatggacccgtcgaatcggcgcgccttctacctgcgccgcaccgttccgtcc
acgtatatgaagctggacagcgcggcgatcgaggcgctgaacctggtgagcaagaagccg
gagccgcgcggcacccttccgacgtctgtgttctcgtggctgaaccgctgtcacactggc
atgggcgcgcgtgcgatgcggcagtggctgctgcagccgctccgctgcgccgaagatatc
aaccagcgcctcacaatggtggaactcttcgtggagaaccccattctacgcgacatgttc
acgacccaggtgctgaagcggtgcggcgacatggatcgacttaaccgcaaactgcagcgt
cgcagcctcgccctgaaggacacgcaggcgttcctggaatttgtgaatgtcgtccctgct
gctctacaggttctgggtacctacacaggcccgcagtcgaagctcttgaaagatgagtac
attgccccgatggaggatatcaacgaccatatggcgaacctgaagacgctgatcgaggca
acggtggacttcagtgaccgcaatgcggtccgcatgaacgccgcgttcgacgacgagctt
caggccctgcatgagcagctcacgagcacgcagcggcagatcgacaaggagtacggccgc
gtcctgagcaagtacgggtggaatgagaagcagctcaagcacgagtaccacggtacgtat
ggctacgtctttcgtgtctcgcgcaaggaggatcgccagctgcgcagcacaaaggaactt
atcacggtaagcacgtccaaggacggcgtacggtttgtgtcagagaagatggcggccctc
agcgagcagtaccggcgcatcagcgacgactacgagacacggcagatggacctcaagcgc
aagcttgtggacaccatcgcctcctacctgcccgtgctcgacgatgccaaggagctgata
gcgaccctggacgtcttcgtggcctgggctctcgtggtgaaggattgcccgcgtcccatg
gtgcggccagctgtacgcgaggcccctggcactgtggcgttggtgaagcaggagggaaca
agcgcacgcggcgcagacgcagcgccgctcctctccttcaagcggctccgtcatcctttg
gtagagcttcgccagccgggctacaaggccaaccctctccatctcaccacgcaaacaaac
ggactgctcattaccggacccaacatgggcggcaagtccacgtacatgcgcagcgtcggt
gtcgcggtggtgctggcgcaagcgggctgctttgtaccggccgatgcggcggaggttcag
gtgcgcgacgctgtcatgtgccgagtcggcgcgaccgatcacttggcacagggcgtctct
acgtttatggtggagatgctcgagtctgcctcgattctcacaggcgcgacgcaggatacc
ctcgccatcatcgacgagctcggccgcggtacgtccacgtacgacggcttcgggttggcg
tgggcgattgcccaggacgtggcggtgcgtgttcgcgcgaccctgttgttctccacacat
tttcacgagctgacgcagctgccgcagcagtgcagcgctctgcagaacatgcactttggc
gccgaggtcgacgagtcggccggaacgctgcgcttctcctacactctccagccaggcccg
tgcggacgcagttacggcctgtacgtcgcgtcgttggcgcacctgccagagtccgtgatt
gcgtgcgccaaggtgaaagttgcggagtgggagacatttgaaaaagagggcgcctccaag
agcagtgctggagcggcgctcgacgaggcggtggtgcggaaggtttcggcgtacgccaag
cgcatccgtgagctggaacagcagggaccgggcgacgatcacgacgcggcggtgcagcgg
ctaaagttagagatccggcaggacgcagatgtccgcccgtatctgtgcgaggtggcgtag

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