Limnohabitans sp. 63ED37-2: L63ED372_00203
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Entry
L63ED372_00203 CDS
T04121
Symbol
topB
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lih03032
]
L63ED372_00203 (topB)
Enzymes [BR:
lih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L63ED372_00203 (topB)
DNA replication proteins [BR:
lih03032
]
Prokaryotic type
DNA Topoisomerases
L63ED372_00203 (topB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
SWIB
Toprim
OrfB_Zn_ribbon
PADR1_Zn_ribbon
HC2
DUF3724
Motif
Other DBs
NCBI-ProteinID:
ALK87432
UniProt:
A0A0N7J878
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All DBs
Position
complement(224390..227326)
Genome browser
AA seq
978 aa
AA seq
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MKTLVIAEKPSVAQDIVKALTPVAGKFEKHDDHFENDRYVVTSAVGHLVEIQAPEQYDVK
RGKWSFANLPVIPPHFDLKPVDKTKSRLTAVVRQAKRKDVDALINACDAGREGELIFRLI
EQYAGGTKPLNKPVQRLWLQSMTPQAIRDGFDSLRSNTQMQGLADAARSRSEADWLVGIN
GTRAMTAFNSRDGGFFLTTVGRVQTPTLAVVVEREEQIRKFISRDYWEIHAEFAAAAGTY
PGKWFDPAWKKDEDAEKKADRKWTAAEAQAIVDAVRGQKASVSEEATPTTQASPGLFDLT
SLQREANGKFGFSAKTTLALAQSLYERHKALTYPRTDSRHLPEDYVPVAKQTFEMLADSG
MRHLAPHALTALNNNYVRKIPRVFDNKKVSDHFAIIPTLQAPSGLSEAEQKLYDLVVRRF
MAVFFPSAEYQVTTRISVAAGHSFKTVGKVLVKPGWLAIYGKEAAAEVEDAKDGDKGQNL
VPVQAGEQVGVESVEAKGLKTRPPARYSEATLLGAMEGAGKLVDDDELREAMQEKGLGTP
ATRAAIIEGLLNEKYMLREGREIIPTAKAFQLMTLLRGLQVEELSRPELTGEWEYKLAQM
EQGKLSRATFMAEIAAMTEHIVKKAKEYDRDTVPGDYATLSTPCPTCGGVVKENYRRYTC
TGADGASDGCGFSFGKSPAGRTFEQVEVEQFMRDKKIGPLEGFRSKAGWPFVAEMALKYN
EEEKNWKLEFDFGDDKKNEESGEIVELTDEALGACPKCGSPVHEHGSNYVCSKAVPTNEQ
PTPSCDFKTGKLILQQPVEREQIVKLLNSGKTDVLDKFVSNRTRRPFKAMLAWNPEEGKV
TFEFEQREGGKKYPPRKTAATKTPFGKAAAKKTTAKTASKTAKAPAAKKAAKPAAEKAPR
KAAVGTLQPSPALMAVIGDGTYARTEVVKKIWDYIKANNLQDPADKRSIKADGKLQAVFG
KESATMFELAGIIGKHLS
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattggtaattgcagagaagccttcggtggctcaagacatcgtcaaggccttg
accccggtggcgggcaagttcgaaaaacacgatgaccatttcgagaacgaccgctacgtc
gtgaccagcgccgtgggtcacctggtggagatccaggcccccgagcaatacgacgtgaaa
cgcggcaagtggagctttgccaatttgccggtgatcccgccgcactttgacttgaagccg
gtggacaaaaccaagagccgcttgacggctgtggtgcgccaggccaagcgcaaggatgtg
gacgccctgatcaacgcctgtgacgcgggccgcgagggtgagttgatcttccgcctgatc
gagcagtacgcaggcggcaccaagcccctgaacaagccggtgcagcgcctgtggctgcag
tcgatgacaccccaggccattcgcgacggctttgacagcctgcgcagcaacacccagatg
cagggcctggccgacgccgcccgcagccgctccgaggccgattggctggtgggcatcaac
ggtacgcgtgccatgaccgccttcaactcgcgcgacggtggcttcttcttgaccacggtg
ggtcgggtgcaaacgcccacactggccgtggtggtggagcgcgaagagcagatccgcaag
ttcatcagccgcgactattgggaaatccacgccgagttcgcggccgccgcaggcacgtat
ccgggcaagtggttcgaccccgcttggaaaaaggacgaagacgctgaaaagaaagccgac
cgcaaatggactgcggccgaagcgcaagccatcgtcgatgcggtgcgtggccaaaaagcc
agcgtgagcgaagaggccacacccaccacccaagccagccccggcttgtttgacctgacg
agtttgcagcgcgaggccaacggcaaattcggtttctcggccaagaccacgctggccttg
gcgcaaagcctgtacgagcgccacaaggccctgacctacccacgtaccgattcgcgccac
ctgcccgaagactacgtgcccgtggccaagcaaacctttgaaatgctggccgacagcggc
atgcgccacctggccccacatgccctcaccgcgctgaacaacaactacgtgcgcaagatc
ccgcgcgtgttcgacaacaaaaaagtgtcggaccacttcgccatcatccccacactgcaa
gcgccgagcggtttgtctgaggcggaacaaaagttgtatgacctggtggtgcgccgcttc
atggcggtgtttttccccagcgccgaataccaagtcaccacccgcatcagcgtggccgca
ggccacagcttcaagaccgtgggcaaggtcttggtcaaaccgggctggctcgccatctac
ggcaaagaagccgccgccgaagtggaagacgccaaagacggtgacaagggccagaacctg
gtgccggtgcaagcgggtgaacaggtcggtgtggagtcggtcgaggccaagggcctgaag
acccggccccccgcccgctattcagaagcgacgttgctgggcgccatggaaggcgcaggc
aaattggtggacgacgacgagctgcgcgaagccatgcaggaaaaaggtctgggcacaccc
gccacgcgcgcagccatcatcgaaggcctgctgaacgaaaagtacatgctgcgcgaaggc
cgcgagatcattcccacggccaaggctttccagctcatgacgctgctgcgcggcttgcag
gtggaagaactctcgcgccccgaactcacgggcgagtgggaatacaagctcgcgcaaatg
gagcaaggcaaattgagccgtgccaccttcatggccgagatcgcggccatgaccgaacac
atcgtcaagaaagccaaagagtacgaccgcgacaccgtgccgggcgactacgccacactc
agcacaccctgccccacttgtggtggtgtggtcaaagaaaactaccgcagatacacctgc
accggggccgacggcgcaagcgacggctgcggcttctcctttggcaaatcgcctgcgggc
cgcacgtttgagcaagtggaggttgagcagttcatgcgcgacaaaaagattggcccattg
gaaggcttccgctccaaggcgggttggccctttgtggccgagatggcgctcaagtacaac
gaagaagaaaagaactggaagctcgaattcgactttggtgacgacaagaaaaacgaagag
agcggtgaaatcgttgagctcaccgacgaggcgctgggcgcttgccccaagtgcggcagc
ccggtgcacgagcacggcagcaactacgtgtgcagcaaggccgtgcccacaaacgaacag
cccacacccagctgcgatttcaaaaccggcaaactcatcttgcagcagcccgtcgagcgc
gagcaaattgtgaaactcttgaacagcggcaaaaccgatgtgctcgacaagtttgtcagc
aaccgcacgcgccgccccttcaaggccatgctggcctggaaccctgaagagggcaaggtg
acgttcgagtttgagcagcgcgaaggtggcaagaagtacccaccgcgcaagacggcagcg
accaagacgccatttggcaaagcggccgccaaaaagaccacggccaaaactgcctcaaaa
accgccaaagccccagccgcgaaaaaagccgccaagcctgctgccgagaaggcgccgcgc
aaagccgctgtgggcaccctccaaccgagcccagccctgatggccgtgatcggtgacggc
acctatgcccgcaccgaggtggtgaaaaaaatctgggactacatcaaggccaacaacttg
caggacccggcagacaagcgctccatcaaggccgatggcaagctgcaagcggtgtttggc
aaggaaagcgccaccatgtttgagttggccggaatcatcggcaagcacctgagctga
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