Limnohabitans sp. 63ED37-2: L63ED372_02412
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Entry
L63ED372_02412 CDS
T04121
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
lih
Limnohabitans sp. 63ED37-2
Brite
KEGG Orthology (KO) [BR:
lih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lih03009
]
L63ED372_02412 (rsmD)
Enzymes [BR:
lih01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
L63ED372_02412 (rsmD)
Ribosome biogenesis [BR:
lih03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
L63ED372_02412 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_31
SAM_MT
Methyltransf_24
PrmA
Methyltransf_15
Met_10
RsmJ
Methyltransf_16
RrnaAD
Motif
Other DBs
NCBI-ProteinID:
ALK89613
UniProt:
A0A0P0MAX6
LinkDB
All DBs
Position
complement(2569100..2569801)
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AA seq
233 aa
AA seq
DB search
MPSSKTSRTTRASGSARSAPAKKPAPRSPKGQPSHEVRIIGGQWRRTRLKVLDKPGLRPT
PDRVRETLFNWLGQDLSGWRCVDAFAGTGVLGLEAASRGAAHVLLVEQDAVLVQLLQDNV
TRLKADAVSVQRGDAVSALGRLPAGSVDLVFIDPPFDGPWFEPALKAATRAVPVGGWIYL
EAPVAWPAEALGVLGLQCERHLKAGAVHAHLLQRTSLEPVPTPTVIPTEGDTP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgccttcttccaaaacctcacgcaccacacgtgccagtggcagcgcccgttcggccccg
gccaagaaaccggctccccgctcccccaaaggccaaccttcgcacgaggtgcgcatcatc
ggcggccagtggcggcgtacgcggctgaaggtgctggacaagccgggcctgcggcccacg
cccgaccgcgtgcgcgagaccttgttcaattggctgggccaggacctgagcggctggcgc
tgcgtggacgcgtttgcgggcacgggtgtgctagggctggaggccgcttcgcgcggtgct
gcccatgtgctgttggtcgagcaggacgctgtgttggtgcagctgctgcaggacaacgtc
acccgcctcaaggccgacgcggtcagcgtgcagcgtggcgacgcagtgagcgctctgggc
cgtttgcccgcgggcagtgtggacctggtcttcatcgacccgcccttcgatggcccctgg
tttgaaccggccctcaaggcggccacccgggccgtgcctgtcggtggctggatttacctg
gaagcgcctgtggcctggcctgccgaggcgctgggggttttgggcttgcagtgcgagcgc
cacctcaaggcgggtgcggtgcacgcacatttgctgcaacgcaccagtctcgaacctgtg
cccaccccgaccgtcatacctactgaaggagacacgccatga
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