Limnohabitans sp. 103DPR2: L103DPR2_01239
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Entry
L103DPR2_01239 CDS
T04120
Name
(GenBank) Farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
lim
Limnohabitans sp. 103DPR2
Pathway
lim00900
Terpenoid backbone biosynthesis
lim01100
Metabolic pathways
lim01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
lim00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
L103DPR2_01239
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lim01006
]
L103DPR2_01239
Enzymes [BR:
lim01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
L103DPR2_01239
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
L103DPR2_01239
Prenyltransferases [BR:
lim01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
L103DPR2_01239
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ALK91641
UniProt:
A0A0P0MEX2
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All DBs
Position
1245595..1246542
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AA seq
315 aa
AA seq
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MSDSFSGNFNFKAWSEARLAQVEQQLKQGIDGHSPAGLGEAMRYAVLDGGKRLRPLLVLA
AAEAIGVDLEAASVSDQPAAIAALRAACAIELIHAYSLVHDDMPCMDNDVLRRGKPTVHV
KYGEAQALLVGDGLQALAFEYLTPLDGSTELEVQALQVGLLARAAGYQGMAGGQAIDLAS
VGLPLTEAQLRQMHRLKTGALLLCSVQMGAVCAGKPSTLVMDALSQYAQCLGLAFQVVDD
ILDVTSDSATLGKTAGKDAAADKPTYVSLLGLAKAQELAEQLHAESLAALTASGLNATAT
AALRALASQVVERKN
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcgactctttttctggcaacttcaatttcaaagcttggtcggaagcccgactggcg
caagtcgagcagcaactcaaacaaggcattgatgggcattcccccgctggtttgggtgaa
gccatgcgctatgccgttttggacggcggcaaacgtttgcgccccttgctggttttggct
gcagcagaagccattggtgtggacttagaagccgccagtgtgtctgatcagcctgccgcc
attgccgcattgcgtgctgcatgcgccattgaattgattcatgcgtattccttggttcac
gatgacatgccttgcatggacaacgatgtgttgcgccgcggcaagcccacggttcatgtg
aaatacggtgaggcgcaggccttgttggtgggtgatggcttgcaagccttggcttttgaa
tacctcacgccattggatggcagcaccgagttggaagttcaggctttgcaagttggcttg
ttggcccgagctgcgggctaccaaggcatggcaggcggccaagccattgacttggccagc
gttggattgcccttgaccgaagcgcaactgcgccaaatgcatcgcctcaaaaccggcgcc
ttgttgttgtgcagcgtgcaaatgggtgccgtctgtgcgggcaagcccagcaccttggtg
atggacgcattgtcgcaatacgcccaatgcttgggtctggcttttcaggtggttgacgac
attttggatgtcacctcagactcggccaccttgggcaaaactgctggcaaagatgccgcg
gccgacaaacccacttatgtgtctttgctaggtcttgccaaagcgcaagaactggcagaa
caacttcatgctgaatcgctggccgcattgactgccagcggtttgaacgccacagccaca
gccgctttgcgcgccttggccagccaagtggtggaacggaaaaattaa
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