Listeria ivanovii subsp. ivanovii PAM 55: LIV_1521
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Entry
LIV_1521 CDS
T01623
Symbol
polA
Name
(GenBank) Putative DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Pathway
liv03030
DNA replication
liv03410
Base excision repair
liv03420
Nucleotide excision repair
liv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LIV_1521 (polA)
03410 Base excision repair
LIV_1521 (polA)
03420 Nucleotide excision repair
LIV_1521 (polA)
03440 Homologous recombination
LIV_1521 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
liv03032
]
LIV_1521 (polA)
03400 DNA repair and recombination proteins [BR:
liv03400
]
LIV_1521 (polA)
Enzymes [BR:
liv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LIV_1521 (polA)
DNA replication proteins [BR:
liv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LIV_1521 (polA)
DNA repair and recombination proteins [BR:
liv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LIV_1521 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LIV_1521 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
LTD
HHH_2
Enkurin
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
CBW86004
UniProt:
G2ZAZ3
LinkDB
All DBs
Position
complement(1589429..1592056)
Genome browser
AA seq
875 aa
AA seq
DB search
MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNVLEKEKPSHVLVAFDAG
KTTFRHATFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQYELANYEADDIIGTLTKKA
EADGLEVAIITGDRDLTQLASNKTTVYITKKGIADMETNTPETLKEKYNLTPAQIIDMKG
LMGDSSDNIPGIPGVGEKTALKLLHEFGGSVESVLEHADEISGKKLKEKVLENKELAILS
KELATINVDSPIEYTIENTKYNGYQTDKVIPLLKEMQFTTLLKNMEGDTPGETKELKELT
FEVVTDLTEKHFGGKTALYVELENDNYHTANFIGLTVHSSNGTYFFTKETAENSSAFKTW
VESGAAKVVYDAKKTMVAMHRLGYAISGITFDIMLASYLLNPSDSIGDFTSVAVRHDYTE
VETDEAIYGKGAKRSTPEESIVAPHLARKAVAVAVLEKGLIDDLEKNEQLALMEDLELPL
TFVLAQMEIQGVSVDTKRLEGMKVELASRLKTLEESIHSLAGEDFNINSPKQLGVILFEK
LGLPAVKKTKTGYSTAADVLESLSGSHDIIDEILLYRQLGKIQSTYIEGLLKVTDKETHK
VHTRFNQTLTQTGRLSSVDPNLQNIPIRLEEGRKIRQVFVPSQPGWKIFSADYSQVELRV
LAHISEDENLIYAFKHDYDIHTKTAMDVFHVEKEEVDSLMRRQAKAVNFGIVYGISDYGL
SQNLGITRKEAKDFIDRYFVSYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNF
NVRGFAERTAMNTPIQGSAADIIKKAMILMNDRLESEKLEAKLLLQVHDELIFEAPEAEI
AKLEEIVPDVMENAVELSVPLKVDSAFGDTWYDAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaattagtattaattgatggaaatagtattgcgaatcgcgctttttatgcgttg
ccgcttttaaataatgacaaaggtgtttatacaaatgcggtgtacggatttgcgatgatg
ctaatgaatgtattagaaaaagaaaagccgagccatgtattagttgcatttgatgctgga
aaaacaacttttcgtcatgccacattcaaaggctataaaggagggcgccaaaaaacaccg
agcgaactatcagaacaatttccatttattcgtgagcttttaactgcttatgatatcccg
caatatgagttagccaactacgaagcggatgatattatcggaactttaacaaaaaaagca
gaagcagacggacttgaagtagccatcattaccggagatcgagatttaacccaacttgct
tctaataagacaacggtctacattacgaaaaaaggcattgcagatatggagaccaataca
ccagaaactttgaaagaaaaatataatttaacccctgcgcaaattattgatatgaaaggg
ttaatgggtgattcatcggacaacattccaggtattccaggtgttggtgaaaaaacagcc
ttaaaactgttacatgaatttggtggaagtgtagaaagtgttttagaacatgccgatgaa
atttctggaaaaaaattaaaagaaaaagtattagaaaataaagaactagcgattttaagt
aaagaactagcaactattaatgttgactcgccgatagaatataccatcgaaaacactaag
tacaacggttaccaaacagataaagtcattccgttactgaaagaaatgcagtttacaacg
ctattaaaaaacatggagggtgatactccaggagaaacaaaagaattaaaagaattaact
tttgaagttgtaacagatttaacagagaaacattttggcggtaaaacagcactttatgtt
gaattagaaaatgacaattaccacacagcgaatttcattggacttacggttcattctagt
aatggaacttactttttcacaaaagaaacagcagaaaatagttcagcatttaaaacgtgg
gtggaaagtggagctgccaaagttgtttatgatgctaaaaaaacaatggtagctatgcac
cgcttgggatatgctatttcaggaattacctttgatattatgttagcttcttatttgttg
aacccatccgactccataggtgacttcacaagtgtagctgttcgtcatgattatacagaa
gtagaaacagatgaagcgatatacggaaaaggtgcgaaacgaagcacgccagaagaaagc
attgttgccccgcatcttgctagaaaagctgtagcggttgctgttttagaaaaaggactt
attgatgacctcgagaaaaatgaacagctagctttaatggaggatttggagttaccttta
acttttgtgctcgcccaaatggaaatacaaggtgtaagcgttgataccaaacgactagaa
ggtatgaaagtagagctagcaagtcgattaaaaacattagaagaatcgattcattcgctt
gctggagaagattttaatattaattcaccgaaacaattaggcgtgattctttttgaaaaa
ctaggacttccagcagtgaagaagactaaaactggctactcgactgccgcagatgttctt
gagagcttatctggcagccatgacattattgatgaaatcttgttatatcgtcagcttggg
aaaatccagtcaacctatatcgaaggtcttctaaaagtaactgataaagaaacgcacaaa
gtccatacccgttttaaccaaacattgacacaaacaggacgtcttagctcggtagatcct
aatttacaaaatatacctatccgtttggaagaaggacgcaaaatcagacaagtttttgtt
ccaagtcagccaggatggaagatattttcagccgattattcgcaagtagaattacgcgta
ttagcacatatttcggaagatgaaaatttaatttatgcctttaagcatgattatgatatc
catacaaaaacagcaatggatgtgtttcatgtggagaaagaagaagtagactcgttaatg
cgccgtcaagcaaaagcggttaactttggtattgtttatggtattagtgattacggtctc
tcacaaaaccttggtattacaagaaaagaagcgaaagattttattgatcgttattttgtc
agttatccggcagtaaaagaatatatgcaagatatcgttcgttttgcgaaagaaaaaggt
tatgtggaaaccattttacaccgtcgtcgatatattccggaaattgtcagtcgtaacttt
aatgttcgcggctttgcagaaagaacggcgatgaatacgccaattcaaggaagcgcagca
gatattattaaaaaagcgatgattttaatgaatgatcgcttagaatcagaaaagttagaa
gctaaattattacttcaagtgcacgatgaacttatttttgaagcacctgaagctgaaatt
gctaaattagaagaaattgtaccagatgtgatggaaaatgctgtagagctatctgtacca
cttaaagtcgatagtgccttcggagacacttggtacgatgcgaaataa
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