Listeria ivanovii subsp. ivanovii PAM 55: LIV_1611
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Entry
LIV_1611 CDS
T01623
Name
(GenBank) Putative ATP-dependent dsDNA exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
liv
Listeria ivanovii subsp. ivanovii PAM 55
Brite
KEGG Orthology (KO) [BR:
liv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
liv03400
]
LIV_1611
DNA repair and recombination proteins [BR:
liv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LIV_1611
Archaeal homologous recombinant proteins
LIV_1611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
CBW86096
UniProt:
G2ZAC2
LinkDB
All DBs
Position
complement(1692783..1695854)
Genome browser
AA seq
1023 aa
AA seq
DB search
MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTIFDAISFAIFGKANTFD
RESFSMRSHFATDKELTEVTLIFRLKEHIYQISRIPQQEIAKQRGNGTTTSPQKAELYEL
IGDEMKLLASSVRDVNTKMEELIQLNVDQFRQILMIPQGEFRELLVSDSKEKEVILQRLA
HTLYYEKVENILWEKQKEAEVLVTEARKKVAELAELSTPGVEVAGKTTVEISTLQTKLIA
QEEGHLSDLERELLVIREETSKAVEKVTLAKEQLLDWHNLDLYSEEVASLEQAMEYYKTM
EERVEKAKRASNLRSQDVLCIRLKEQLQTAEMTEKQVVKDAEKVAEQFANAKKQKEMLAE
QEAEYEKNKQHLFQLEEMEPKIIELETITVQKCRAELAWKEQADLLQKVMTNQQALLEEL
HLAETQLTEITKAELASLEAINQRTTIESLMEKNQELINKRTKMISWEKQKQTAEQTLTQ
LLSEKAAIEAMIKQEEAKFEKEQAAIFAEHLHDGEACPVCGSHTHPELATWKEAADAEKL
EAAKADLQAKQLTIAATEKSISQLEWQLNEWADVQDLSLAEVEKHLAEQQQSTKELTKQI
EELQLKVAQKETIQTKMTTLKNKQTEAESEKNNLGGQVESLHQQVQLTTGKLTYLEQSIP
ASIRDKAIFDQQKNTLQANIQNYKEKKERVDAAYQQAEKETTRLESTLTVAIKTTADAKN
ALQVQREIFKVAMKENHFSSYEDYKYALLSDEELTSLEAQISEYQKKRHLAISRQADLTV
KLKDKQKPNIEQLEIFMKEKQQILTEIEEKTMRQRELVTKRKELVENYQKSIQTVEQAET
SYADIGLLSDVARGKNPRRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELRRKIEKAK
GNVQSGLELEVFDEYTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFID
EGFGTLDPESLEVAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFIT
ANS
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaccaatcaaactaacaatgcaagcttttggtgcttacgctaaaaaagaagtgatc
gattttgagaaactgggaacagagcaaatctttgtcatttctggaaaaacgggtgctggt
aaatcaactatttttgatgcaattagttttgcgatatttggaaaagcaaatacgtttgat
agagagagtttctcgatgcgtagtcattttgcgacggataaagaacttacagaagtgacg
ctcatttttagactgaaagagcatatttatcagattagccgtattcctcagcaagaaatt
gccaaacagcgcggaaacgggacgacaacttctcctcaaaaagccgaattatatgaactg
attggcgatgaaatgaaattactagcaagttcagttcgagatgttaatacgaaaatggaa
gagctaattcaattaaatgtcgatcaatttagacaaattttgatgattccccaaggtgag
tttcgtgaactacttgtttctgatagtaaagaaaaagaagtaatattgcaacgacttgcg
catacgctttattatgaaaaagtagaaaatattttatgggaaaagcaaaaagaagcagaa
gttttagtaacagaagccaggaaaaaagtggccgaacttgcggaacttagcacaccgggt
gtagaagttgctgggaagacgaccgtcgaaatcagtacactccaaaccaagcttattgcc
caagaagaaggtcatttatccgatttagaacgggaattacttgttatccgagaagaaact
agtaaagcagttgaaaaagtgacgttagctaaagaacagctacttgattggcataattta
gacttatattcagaggaagtagcatcactcgaacaagcgatggagtattataaaacgatg
gaagaacgcgttgaaaaagcaaaaagagcgagtaatttacgttcacaagatgtcctttgt
attcgtttaaaagaacaattacaaacagcagaaatgactgaaaaacaagttgtcaaggat
gctgaaaaagtagcagaacaatttgcaaacgctaaaaagcaaaaagaaatgcttgctgaa
caagaagctgaatatgaaaaaaacaagcaacatctgttccaactagaagaaatggaaccg
aaaattatcgaactggaaacaattaccgtgcaaaaatgtcgtgccgaattagcgtggaaa
gaacaagcagatcttttacaaaaagtcatgacgaatcagcaagcgttattggaagaatta
catttagcagaaacacagttgactgaaataacgaaagctgaattagctagcctagaagcc
atcaaccaacgaacaaccatcgaatcactgatggaaaaaaatcaagaattgataaataaa
cgaacaaaaatgatttcttgggagaaacaaaagcaaacagcagaacaaactttaacgcaa
cttttatctgaaaaagcagctatcgaggcgatgataaaacaagaagaagcaaagttcgaa
aaagaacaagctgcgatttttgcggaacatctacatgacggagaagcttgtcctgtctgt
ggttcccatacgcatccagaactggcgacttggaaagaggctgctgatgcagaaaaatta
gaagcagcaaaagcagatttacaagctaaacaattaacaattgctgctacagaaaaatcg
attagtcaactcgaatggcaattaaacgagtgggcggatgttcaagatttaagtttagca
gaagtagaaaagcatttggcggaacaacagcagtcaacaaaagagctaacgaaacaaatc
gaggaattacaattaaaagtagctcaaaaagaaaccatccaaacaaaaatgaccacatta
aaaaacaaacaaacggaagccgaatcagaaaaaaataatttaggagggcaagtggaaagc
ttacatcaacaggtgcaactaacgacagggaaattgacttatttagaacaatctattcca
gctagtatacgagataaggctatttttgatcaacagaaaaacacgcttcaagcgaatatt
caaaactataaagagaaaaaagagcgagtggatgcagcctatcaacaagcagaaaaagaa
actactagattagaatccactttaactgttgctatcaaaacaacagctgatgcgaaaaat
gctttacaagtgcaacgagaaatttttaaagtggcgatgaaggagaaccatttttctagt
tatgaagattataaatatgctttactatcagatgaggagttaacaagtcttgaggcccaa
atttctgagtaccagaaaaaacggcatttagcaatatctcgccaagcagatttaactgta
aaactaaaagataaacaaaagccaaatatcgaacaactagaaattttcatgaaagaaaaa
caacaaatattaacagaaatagaagaaaaaacaatgaggcaacgtgaactagtaacaaaa
cgtaaagaactcgtagaaaattatcaaaaaagtattcaaacagtagaacaagccgaaaca
agttatgcagatatcggtttgttatctgatgtagcacgaggcaaaaatccacgtagacta
acctttgaacggtatatattggccatgtttttagatacgattattcaccgagcaaaccat
cgattatcgaaaatgaccagtgggcgatttgagctacgtcgaaaaattgaaaaagctaaa
ggaaatgtccaaagtgggctagaattagaagtctttgatgaatatacaggattaactcgc
catgtgaagacactttcgggaggagagagctttaaaacctcactggcacttgctttatct
ctagcagaagtggtacaagaaatggctggaggaatttcacttgagacaatgtttattgat
gaaggttttggaacactcgacccagaatcgcttgaagtagcagtggaatgtctactcgaa
actcaggaaaatggccgtctagttgggataatctcacatgttcctgagctaaaagagcga
atttctgcaaggcttgaagtaaccgcaacaaaccatggtagtaccacaaaatttattacg
gctaatagctaa
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