KEGG   Lotus japonicus: Lj2g3v3339160.1
Entry
Lj2g3v3339160.1   CDS       T04348                                 
Symbol
Lj2g3v3339160.1
Name
(Kazusa) -
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
lja  Lotus japonicus
Pathway
lja03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    Lj2g3v3339160.1 (Lj2g3v3339160.1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lja03019]
    Lj2g3v3339160.1 (Lj2g3v3339160.1)
   03036 Chromosome and associated proteins [BR:lja03036]
    Lj2g3v3339160.1 (Lj2g3v3339160.1)
Messenger RNA biogenesis [BR:lja03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     Lj2g3v3339160.1 (Lj2g3v3339160.1)
Chromosome and associated proteins [BR:lja03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    Lj2g3v3339160.1 (Lj2g3v3339160.1)
SSDB
Motif
Pfam: Nup96 Nucleoporin2 CHGN
LinkDB
AA seq 962 aa
MECGAGYISDSFVLHSCKKRRVSECCVMTGIEASLPVLLSPGYYTKPSLKELRARELVDP
GYCSRVPDFTVGRFGYGFVRFLSETDVRGLGLDEIVEFHRHEVVVYGDENDKPEVGEGLN
KAAEVVLVLDSGMLKSREWGEDVLVKKLKQIAERQGAKFVSFDAVTGEWKFMVQHFSRFG
FGDDDEEDIVMNDAEIYDAEKESPIDTDGLELSHSLPAHLRLDPVKMKEMRLLMFHDEEE
DMEDSDQKSSSGKEYVRPLQRSAQEVTHRSTPPTVRKTPFPLLEYKRGNFDSDSPGAILM
AQQHKGMPLRTVKAQGFKLDLKHETPVSGNYAHNIVDAGLFMGKSFRVGWGPNGVLVHSG
APVGSGGSHTLLSSVINLEKVAFDNSVRDENKKVSEELVDSALVSPLNFHKGINHVMKEV
EIGHCKLTLQKLEADRTTLSEISHQYCDVIERQLSVPGLSSSARLGLTHQVMTWELIRVL
FADRRPKSPVESLGADNEEDMMQDTKEVSQDVDQEALPLMRRAEFSYWLRESVSYHVQNQ
ISSLNDSHYLEHIFLLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTVNRSDIARQLDV
WRNKGLDFSFIEKDRLRLYELLSGNVHDALHDIKIDWRRFLGLLTWYKLPPDTSLSITFQ
TYKHFLDEGAAPYPVPLFIDEGTPEEAVSWKADKHFDISFYLMLLHASEEKEFSSLKAMF
SAFSSTPDPLDYHMIWHQREVLEAVGVISSNDLHILDMGFVSQLLCLGKCHWAIYVVLHL
PLREDYPYLHVNLIREILFQYCETWSSDESQYRFIEDLGIPTEWMHEALAIYHNYNGNLS
EALEQFLQCANWQKAHTIFITSVAHKLFLEDKHTEIWRIATYMEDHKSEIENWELGAGIY
ISFYLMRNSLQGDADAMTEMDSLQSKNAACQSFVSQLNESLAVWGVRLPVDARVVYSKMG
GE
NT seq 2886 nt   +upstreamnt  +downstreamnt
atggaatgcggtgcaggatacatttctgattctttcgttctgcacagttgcaagaaaaga
agggtttctgaatgctgcgtcatgacaggaattgaagcttccttgcctgttttgttgtcg
cctggttattacacgaagccgtcgttgaaggaactgagggcgcgagaacttgttgatccc
ggttactgcagtcgtgtgccggattttacggttggaagattcggctatggattcgtgagg
tttctaagtgaaactgatgttagagggttaggtctagatgaaattgtggagtttcatagg
catgaggtagttgtgtatggtgatgagaatgataagcctgaagttggggaggggcttaac
aaggcggctgaagtggttttggtgctggacagtggaatgttgaagtctagggagtggggc
gaagatgttctggtgaagaagttgaaacaaattgcagagaggcaaggagcaaagtttgtt
tcctttgatgctgtgactggtgagtggaaattcatggttcaacatttcagtaggtttggg
tttggtgacgatgatgaagaagacattgttatgaatgatgctgagatatatgacgctgag
aaggaatctccgatagatactgatgggcttgagctttctcattctcttcctgctcatctt
agacttgatcctgttaagatgaaagaaatgagattgttgatgtttcatgatgaagaagag
gatatggaggactcagatcagaaatcatcttctggtaaggagtatgtgaggcctttacaa
cgttctgctcaggaagtgacccatagatctactccgccaactgttcgaaaaactccattt
ccattacttgagtataaacgcgggaattttgattcagattcccctggagccattttgatg
gctcagcaacataagggcatgcctctaaggacagtaaaagcacaaggttttaagctagac
ctcaagcatgaaactccagtatctggaaactatgctcacaacatagtggatgctggtctg
tttatgggcaagtcctttcgagttgggtggggaccgaatggggttctcgtacattctggt
gcgcctgtaggaagtggtggcagtcacacgctattatcatctgttatcaatttggagaaa
gttgcttttgacaattcggtcagggatgaaaataaaaaagtgagtgaggaacttgtagac
tctgctctggtttctccgttaaattttcacaaaggaataaaccatgtgatgaaagaagtt
gaaattggtcactgcaagttgacacttcaaaagcttgaagctgatcgtacaaccctgtca
gagatttctcatcagtactgtgatgtcatcgagagacaattaagtgttcctggactatct
tcctctgcccggttgggtttgactcaccaagtaatgacctgggagttaattagagttctt
tttgctgatagaagaccaaaaagtccagtagaatctttgggtgctgacaatgaggaagat
atgatgcaggatacgaaggaagttagtcaagatgttgatcaagaagcactccctcttatg
aggagggcagagttcagttattggttgcgtgagagtgtttcctatcatgttcaaaatcaa
ataagctctctaaatgactctcattatctagaacatatttttctgctcttgactgggcga
caactggatgaagcagtgcagctggctgtttcgaaaggagatgtgaggttggcttgtttg
ttaagtcaggccggtggttctacagtgaatcgctctgatattgcaaggcaacttgatgtc
tggagaaacaaagggcttgattttagtttcattgaaaaggacagattgagactctatgaa
ttgctttctggaaatgttcatgatgctttgcatgatatcaaaattgactggaggaggttc
ttaggtttattaacgtggtacaaattaccacctgatacttcattatccatcacttttcag
acttataagcattttcttgatgagggagcagctccatatcctgttcccctttttattgat
gaaggaacaccagaggaggctgtcagttggaaagcagataaacactttgacatctcattt
tatctcatgcttcttcatgctagtgaagagaaggaattcagctctctgaaggctatgttt
agtgctttctcgtcaacccctgatccacttgactatcatatgatctggcatcaacgcgaa
gtcttggaagcagttggtgttatcagttctaatgatcttcatattctagacatgggattt
gtgtctcagcttctgtgcttaggcaaatgccattgggccatatatgtggtccttcacttg
ccccttcgtgaagattatccatatcttcacgtaaatctgattcgggaaatattgttccaa
tactgtgaaacttggagttcagatgaatctcaatatcgtttcatcgaggatttaggcatt
cccacagaatggatgcatgaggctttggcaatttatcataattataatgggaatctctca
gaagcccttgagcaatttcttcagtgtgctaattggcagaaagctcataccatttttata
acttcagttgcacataagttattcttggaagacaaacacactgagatatggcggattgca
acttacatggaggaccataaatctgaaattgaaaactgggagttgggagctggaatttat
atttcattttatttgatgagaaactcacttcagggagatgctgatgccatgactgaaatg
gattctcttcaaagtaaaaatgctgcttgtcagagttttgtcagtcagttaaatgaatct
ctggcagtttggggtgtcagattaccagttgatgcaagggtggtatattcaaaaatggga
ggcgag

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