Lotus japonicus: Lj2g3v3339160.1
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Entry
Lj2g3v3339160.1 CDS
T04348
Symbol
Lj2g3v3339160.1
Name
(Kazusa) -
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
lja
Lotus japonicus
Pathway
lja03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Lj2g3v3339160.1 (Lj2g3v3339160.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lja03019
]
Lj2g3v3339160.1 (Lj2g3v3339160.1)
03036 Chromosome and associated proteins [BR:
lja03036
]
Lj2g3v3339160.1 (Lj2g3v3339160.1)
Messenger RNA biogenesis [BR:
lja03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Lj2g3v3339160.1 (Lj2g3v3339160.1)
Chromosome and associated proteins [BR:
lja03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Lj2g3v3339160.1 (Lj2g3v3339160.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
CHGN
Motif
LinkDB
All DBs
AA seq
962 aa
AA seq
DB search
MECGAGYISDSFVLHSCKKRRVSECCVMTGIEASLPVLLSPGYYTKPSLKELRARELVDP
GYCSRVPDFTVGRFGYGFVRFLSETDVRGLGLDEIVEFHRHEVVVYGDENDKPEVGEGLN
KAAEVVLVLDSGMLKSREWGEDVLVKKLKQIAERQGAKFVSFDAVTGEWKFMVQHFSRFG
FGDDDEEDIVMNDAEIYDAEKESPIDTDGLELSHSLPAHLRLDPVKMKEMRLLMFHDEEE
DMEDSDQKSSSGKEYVRPLQRSAQEVTHRSTPPTVRKTPFPLLEYKRGNFDSDSPGAILM
AQQHKGMPLRTVKAQGFKLDLKHETPVSGNYAHNIVDAGLFMGKSFRVGWGPNGVLVHSG
APVGSGGSHTLLSSVINLEKVAFDNSVRDENKKVSEELVDSALVSPLNFHKGINHVMKEV
EIGHCKLTLQKLEADRTTLSEISHQYCDVIERQLSVPGLSSSARLGLTHQVMTWELIRVL
FADRRPKSPVESLGADNEEDMMQDTKEVSQDVDQEALPLMRRAEFSYWLRESVSYHVQNQ
ISSLNDSHYLEHIFLLLTGRQLDEAVQLAVSKGDVRLACLLSQAGGSTVNRSDIARQLDV
WRNKGLDFSFIEKDRLRLYELLSGNVHDALHDIKIDWRRFLGLLTWYKLPPDTSLSITFQ
TYKHFLDEGAAPYPVPLFIDEGTPEEAVSWKADKHFDISFYLMLLHASEEKEFSSLKAMF
SAFSSTPDPLDYHMIWHQREVLEAVGVISSNDLHILDMGFVSQLLCLGKCHWAIYVVLHL
PLREDYPYLHVNLIREILFQYCETWSSDESQYRFIEDLGIPTEWMHEALAIYHNYNGNLS
EALEQFLQCANWQKAHTIFITSVAHKLFLEDKHTEIWRIATYMEDHKSEIENWELGAGIY
ISFYLMRNSLQGDADAMTEMDSLQSKNAACQSFVSQLNESLAVWGVRLPVDARVVYSKMG
GE
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaatgcggtgcaggatacatttctgattctttcgttctgcacagttgcaagaaaaga
agggtttctgaatgctgcgtcatgacaggaattgaagcttccttgcctgttttgttgtcg
cctggttattacacgaagccgtcgttgaaggaactgagggcgcgagaacttgttgatccc
ggttactgcagtcgtgtgccggattttacggttggaagattcggctatggattcgtgagg
tttctaagtgaaactgatgttagagggttaggtctagatgaaattgtggagtttcatagg
catgaggtagttgtgtatggtgatgagaatgataagcctgaagttggggaggggcttaac
aaggcggctgaagtggttttggtgctggacagtggaatgttgaagtctagggagtggggc
gaagatgttctggtgaagaagttgaaacaaattgcagagaggcaaggagcaaagtttgtt
tcctttgatgctgtgactggtgagtggaaattcatggttcaacatttcagtaggtttggg
tttggtgacgatgatgaagaagacattgttatgaatgatgctgagatatatgacgctgag
aaggaatctccgatagatactgatgggcttgagctttctcattctcttcctgctcatctt
agacttgatcctgttaagatgaaagaaatgagattgttgatgtttcatgatgaagaagag
gatatggaggactcagatcagaaatcatcttctggtaaggagtatgtgaggcctttacaa
cgttctgctcaggaagtgacccatagatctactccgccaactgttcgaaaaactccattt
ccattacttgagtataaacgcgggaattttgattcagattcccctggagccattttgatg
gctcagcaacataagggcatgcctctaaggacagtaaaagcacaaggttttaagctagac
ctcaagcatgaaactccagtatctggaaactatgctcacaacatagtggatgctggtctg
tttatgggcaagtcctttcgagttgggtggggaccgaatggggttctcgtacattctggt
gcgcctgtaggaagtggtggcagtcacacgctattatcatctgttatcaatttggagaaa
gttgcttttgacaattcggtcagggatgaaaataaaaaagtgagtgaggaacttgtagac
tctgctctggtttctccgttaaattttcacaaaggaataaaccatgtgatgaaagaagtt
gaaattggtcactgcaagttgacacttcaaaagcttgaagctgatcgtacaaccctgtca
gagatttctcatcagtactgtgatgtcatcgagagacaattaagtgttcctggactatct
tcctctgcccggttgggtttgactcaccaagtaatgacctgggagttaattagagttctt
tttgctgatagaagaccaaaaagtccagtagaatctttgggtgctgacaatgaggaagat
atgatgcaggatacgaaggaagttagtcaagatgttgatcaagaagcactccctcttatg
aggagggcagagttcagttattggttgcgtgagagtgtttcctatcatgttcaaaatcaa
ataagctctctaaatgactctcattatctagaacatatttttctgctcttgactgggcga
caactggatgaagcagtgcagctggctgtttcgaaaggagatgtgaggttggcttgtttg
ttaagtcaggccggtggttctacagtgaatcgctctgatattgcaaggcaacttgatgtc
tggagaaacaaagggcttgattttagtttcattgaaaaggacagattgagactctatgaa
ttgctttctggaaatgttcatgatgctttgcatgatatcaaaattgactggaggaggttc
ttaggtttattaacgtggtacaaattaccacctgatacttcattatccatcacttttcag
acttataagcattttcttgatgagggagcagctccatatcctgttcccctttttattgat
gaaggaacaccagaggaggctgtcagttggaaagcagataaacactttgacatctcattt
tatctcatgcttcttcatgctagtgaagagaaggaattcagctctctgaaggctatgttt
agtgctttctcgtcaacccctgatccacttgactatcatatgatctggcatcaacgcgaa
gtcttggaagcagttggtgttatcagttctaatgatcttcatattctagacatgggattt
gtgtctcagcttctgtgcttaggcaaatgccattgggccatatatgtggtccttcacttg
ccccttcgtgaagattatccatatcttcacgtaaatctgattcgggaaatattgttccaa
tactgtgaaacttggagttcagatgaatctcaatatcgtttcatcgaggatttaggcatt
cccacagaatggatgcatgaggctttggcaatttatcataattataatgggaatctctca
gaagcccttgagcaatttcttcagtgtgctaattggcagaaagctcataccatttttata
acttcagttgcacataagttattcttggaagacaaacacactgagatatggcggattgca
acttacatggaggaccataaatctgaaattgaaaactgggagttgggagctggaatttat
atttcattttatttgatgagaaactcacttcagggagatgctgatgccatgactgaaatg
gattctcttcaaagtaaaaatgctgcttgtcagagttttgtcagtcagttaaatgaatct
ctggcagtttggggtgtcagattaccagttgatgcaagggtggtatattcaaaaatggga
ggcgag
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integrated database retrieval system