KEGG   Lotus japonicus: Lj4g3v2119290.2
Entry
Lj4g3v2119290.2   CDS       T04348                                 
Symbol
Lj4g3v2119290.2
Name
(Kazusa) -
  KO
K10739  replication factor A2
Organism
lja  Lotus japonicus
Pathway
lja03030  DNA replication
lja03420  Nucleotide excision repair
lja03430  Mismatch repair
lja03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lja00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lj4g3v2119290.2 (Lj4g3v2119290.2)
   03420 Nucleotide excision repair
    Lj4g3v2119290.2 (Lj4g3v2119290.2)
   03430 Mismatch repair
    Lj4g3v2119290.2 (Lj4g3v2119290.2)
   03440 Homologous recombination
    Lj4g3v2119290.2 (Lj4g3v2119290.2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lja03032]
    Lj4g3v2119290.2 (Lj4g3v2119290.2)
   03400 DNA repair and recombination proteins [BR:lja03400]
    Lj4g3v2119290.2 (Lj4g3v2119290.2)
DNA replication proteins [BR:lja03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    Lj4g3v2119290.2 (Lj4g3v2119290.2)
DNA repair and recombination proteins [BR:lja03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     Lj4g3v2119290.2 (Lj4g3v2119290.2)
   MMR (mismatch excision repair)
     Lj4g3v2119290.2 (Lj4g3v2119290.2)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     Lj4g3v2119290.2 (Lj4g3v2119290.2)
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon Swm2
LinkDB
AA seq 278 aa
MHASQFDGNAAFPGGGFMPSQATQGHDQPFFPPKNRDAQSLLPLTIKQIKYAVQSNDDKT
NLIIDGVDVNNVTLVGRVCNKAGRVTDVTFVLDDGTGRIDCNKWLQEAAESNEVESIIMD
GVYLRLHGQLKGFQGKRTLNVFSFRPVTDFNEIASHFIDCIYVHLYNSRLRASVPVQQHV
SNSTQITPTKGYQAQAVPPNQFSGQQNNGQNRNSLENMVLDVLLLPTSRAKEEGVSQDLI
AQHLGIPLDKLMPAIKSLGDDGAIYETIAEHYKSIVDC
NT seq 840 nt   +upstreamnt  +downstreamnt
atgcatgccagccagttcgacggcaatgcagccttccccggcggcggattcatgccttct
caggccactcagggccatgaccagcccttcttcccccccaagaatcgtgatgctcagtcc
ttgcttcctctcacgatcaagcagataaaatacgctgttcaatcaaatgatgataaaacc
aatttgattatcgacggtgtcgacgttaacaatgttactcttgtaggaagggtgtgcaac
aaagctggaagggttactgatgttacttttgtacttgatgatggtactggaaggattgat
tgtaacaaatggcttcaggaagctgcagaatctaatgaagtggagagtattatcatggat
ggggtgtatctgcggctacatggacagttgaaggggtttcagggtaaaaggactttaaat
gttttctctttcaggcctgtgactgacttcaacgagattgccagccatttcattgattgc
atatatgttcatctctataattccagattacgggctagtgtccctgttcagcaacatgtt
tctaattccacacaaattactcccacaaaaggttatcaagctcaagctgtcccaccaaat
caattctctggtcaacaaaacaatggtcagaataggaatagccttgaaaatatggtttta
gacgttttacttcttcccacaagcagggcaaaggaggagggagtctctcaagatcttatt
gcacagcatcttggaattccattggataagctcatgccggctattaagagtcttggtgat
gacggtgccatttacgaaactatagctgagcactacaagtcaatcgtcgattgttgagat

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