Lotus japonicus: Lj4g3v2119290.2
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Entry
Lj4g3v2119290.2 CDS
T04348
Symbol
Lj4g3v2119290.2
Name
(Kazusa) -
KO
K10739
replication factor A2
Organism
lja
Lotus japonicus
Pathway
lja03030
DNA replication
lja03420
Nucleotide excision repair
lja03430
Mismatch repair
lja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Lj4g3v2119290.2 (Lj4g3v2119290.2)
03420 Nucleotide excision repair
Lj4g3v2119290.2 (Lj4g3v2119290.2)
03430 Mismatch repair
Lj4g3v2119290.2 (Lj4g3v2119290.2)
03440 Homologous recombination
Lj4g3v2119290.2 (Lj4g3v2119290.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lja03032
]
Lj4g3v2119290.2 (Lj4g3v2119290.2)
03400 DNA repair and recombination proteins [BR:
lja03400
]
Lj4g3v2119290.2 (Lj4g3v2119290.2)
DNA replication proteins [BR:
lja03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Lj4g3v2119290.2 (Lj4g3v2119290.2)
DNA repair and recombination proteins [BR:
lja03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Lj4g3v2119290.2 (Lj4g3v2119290.2)
MMR (mismatch excision repair)
Lj4g3v2119290.2 (Lj4g3v2119290.2)
DSBR (double strand breaks repair)
HR (homologous recombination)
Lj4g3v2119290.2 (Lj4g3v2119290.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
Swm2
Motif
LinkDB
All DBs
AA seq
278 aa
AA seq
DB search
MHASQFDGNAAFPGGGFMPSQATQGHDQPFFPPKNRDAQSLLPLTIKQIKYAVQSNDDKT
NLIIDGVDVNNVTLVGRVCNKAGRVTDVTFVLDDGTGRIDCNKWLQEAAESNEVESIIMD
GVYLRLHGQLKGFQGKRTLNVFSFRPVTDFNEIASHFIDCIYVHLYNSRLRASVPVQQHV
SNSTQITPTKGYQAQAVPPNQFSGQQNNGQNRNSLENMVLDVLLLPTSRAKEEGVSQDLI
AQHLGIPLDKLMPAIKSLGDDGAIYETIAEHYKSIVDC
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcatgccagccagttcgacggcaatgcagccttccccggcggcggattcatgccttct
caggccactcagggccatgaccagcccttcttcccccccaagaatcgtgatgctcagtcc
ttgcttcctctcacgatcaagcagataaaatacgctgttcaatcaaatgatgataaaacc
aatttgattatcgacggtgtcgacgttaacaatgttactcttgtaggaagggtgtgcaac
aaagctggaagggttactgatgttacttttgtacttgatgatggtactggaaggattgat
tgtaacaaatggcttcaggaagctgcagaatctaatgaagtggagagtattatcatggat
ggggtgtatctgcggctacatggacagttgaaggggtttcagggtaaaaggactttaaat
gttttctctttcaggcctgtgactgacttcaacgagattgccagccatttcattgattgc
atatatgttcatctctataattccagattacgggctagtgtccctgttcagcaacatgtt
tctaattccacacaaattactcccacaaaaggttatcaagctcaagctgtcccaccaaat
caattctctggtcaacaaaacaatggtcagaataggaatagccttgaaaatatggtttta
gacgttttacttcttcccacaagcagggcaaaggaggagggagtctctcaagatcttatt
gcacagcatcttggaattccattggataagctcatgccggctattaagagtcttggtgat
gacggtgccatttacgaaactatagctgagcactacaagtcaatcgtcgattgttgagat
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