Lactobacillus johnsonii FI9785: FI9785_416
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Entry
FI9785_416 CDS
T01120
Symbol
radA
Name
(GenBank) DNA repair protein radA
KO
K04485
DNA repair protein RadA/Sms
Organism
ljf
Lactobacillus johnsonii FI9785
Brite
KEGG Orthology (KO) [BR:
ljf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ljf03400
]
FI9785_416 (radA)
DNA repair and recombination proteins [BR:
ljf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FI9785_416 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Rubredoxin_2
DnaB_C
ChlI
Lon_C
AAA
AAA_24
GvpD_P-loop
AAA_16
AAA_22
nSTAND3
ABC_tran
RUBY_RBDX
AAA_14
AAA_5
SLFN-g3_helicase
divDNAB
NACHT
MMR_HSR1
NTPase_1
CbiA
ATPase_2
DAP3
HypA
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAX66299
UniProt:
D0R293
LinkDB
All DBs
Position
359275..360654
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AA seq
459 aa
AA seq
DB search
MAKVKTRYKCRNCGYISASYLGRCPNCGAWNQFEEETQEIKKVSAKATASRLITKIGNND
PVKLTEVKAEKEKRIVTPFEELNRVLGGGIVPGSLVLIGGDPGIGKSTLMLQITGALAKE
YSVLYVSGEESASQIKMRADRLGVSDSGILLYPETNMQNIRDQIDEIKPDFLVIDSIQTM
NEPSLDSMVGSASQVREVTSELMKIAKNEQITTFVIGHVTKEGAIAGPKIMEHMVDTVLY
FEGDGHHSYRILRSVKNRFGAANEIGMFEMKNEGLAEVSNPSAIFLDERLPNSTGSSVVV
SLEGTRPLLADIQALVTPTAFGYAKRTTSGLDFNRVALLLAVLEKRGNLMLQNQDAFLTA
TGGIKLNEPAIDLAICMAVASSYKNKEISSTDCFVGEVGLTGEIRRVNQIEARVKEAAKV
GFKRIFIPKNNLNQDLKNNSEIEVIGVASLPQALKLVFN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagttaaaactcgttataagtgtcgtaattgtggatatatttctgcttcctat
cttggaagatgtcccaattgtggtgcttggaatcaatttgaagaagagacacaggaaatt
aaaaaagtatcagctaaggcaactgcaagccggttgataactaaaattggaaataatgat
ccagtaaagttaactgaagtaaaagctgagaaagaaaaaagaattgtgactccttttgaa
gaattaaatcgagttttaggaggagggattgttccaggatctttagttttaattggagga
gatccaggaattggaaaatcaaccttaatgcttcaaattactggtgctttagctaaagaa
tatagcgtcttatatgtttcaggagaagagtctgcgagtcaaataaagatgcgagcagat
cgactaggagtaagcgatagcggaattttgctttatccagaaacaaatatgcagaatatt
cgtgaccagattgatgaaattaagccagattttttggtaattgactctattcaaacaatg
aacgaaccttcacttgattcaatggttggatctgcttctcaagtacgtgaagtaacaagt
gaattaatgaaaattgctaaaaatgaacaaataactacttttgttattgggcatgtaact
aaagaaggagcaattgctggtcccaagattatggaacatatggttgataccgtcctttac
tttgaaggggatgggcaccactcatatcgaattttaagatcagtcaagaatcgttttggc
gcagctaatgaaattggaatgtttgagatgaaaaatgaagggttagcagaagtaagtaat
ccttcagctattttcttagacgaacgcttacctaattcgactggatcttcagttgtcgtt
tcacttgaaggaacgcggccgcttcttgcggatattcaagctttagtaaccccaacagca
ttcggatatgcaaaaagaacaacttcaggattagattttaatcgagtagcacttttattg
gcagttttagaaaaaagaggcaacttaatgcttcaaaatcaagatgcttttctaactgca
actggtgggattaaattaaatgaaccagcaattgatcttgcaatttgtatggcggttgct
tcaagttacaaaaataaagaaatttcttcgactgattgctttgtaggtgaagttggctta
actggtgaaattagaagagttaatcaaattgaagctagagttaaagaggctgcaaaagta
ggctttaagaggatttttatccctaaaaacaacttaaaccaggaccttaagaataactct
gagatcgaagtaattggagtagcaagtttaccacaagctttaaaacttgtttttaactag
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