Lactobacillus kefiranofaciens subsp. kefiranofaciens: WANG_0240
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Entry
WANG_0240 CDS
T01526
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lke
Lactobacillus kefiranofaciens subsp. kefiranofaciens
Pathway
lke03030
DNA replication
lke03410
Base excision repair
lke03420
Nucleotide excision repair
lke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
WANG_0240
03410 Base excision repair
WANG_0240
03420 Nucleotide excision repair
WANG_0240
03440 Homologous recombination
WANG_0240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lke03032
]
WANG_0240
03400 DNA repair and recombination proteins [BR:
lke03400
]
WANG_0240
Enzymes [BR:
lke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
WANG_0240
DNA replication proteins [BR:
lke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
WANG_0240
DNA repair and recombination proteins [BR:
lke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
WANG_0240
NER (nucleotide excision repair)
GGR (global genome repair) factors
WANG_0240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_5
HHH_2
DUF61
DUF3081
Motif
Other DBs
NCBI-ProteinID:
AEG39935
LinkDB
All DBs
Position
250355..253018
Genome browser
AA seq
887 aa
AA seq
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MADKKLLLIDGNSVAFRAFYALYRQLESFKNPEGLHTNAIYAFKNMLDVLLKDVEPTNVL
VAFDAGKVTFRTKMYSDYKGGRAKTPEELLEQMPYIQELLHDLGIKTYELKDYEADDIIG
TFVQKGEDAGFTTTVVTGDRDLTQLASDKTTVEVTKSGVSQLEAYTPEHMKEVNGVTPTE
FIDMKALMGDNSDNYPGVTKVGPKTASRLIQKYGSVEDLYEHVDEMKKSKLKENLINDKD
KAFLAKKLATIDRDSPVTIGIDDVKREPVDYEKLRQFYEQMNFRKFLADLNASGKGQAAT
EVEKVEYTVLNDQNVKDIKASENDQVEFYLAMLGANYHLADFVGFSLKINDQIYVSRDVD
LLSEDNLKHLLEDEKIKKNVFDLKRTTVGLNRLGIHAHGLDYDMLLASYLVNNENNSNDL
GEIAHLYGDYSVKTDIEVYGKGKSEHVPDEDDDLFNHLASKVNVIAKLKEPLLQKLKEHE
QDDLFDTIEIPTARVLAKMEMNGMKVEASTLIQLQNEFAVKLKELEDKIYQQAGERFNLN
SPKQLGHILFEKLNLPVLKKTKTGYSTSVEVLDQLKTQSPIVSEILDYRQIAKIQSTYVK
GLLDVIQPDGRVHTRYLQTLTATGRLSSVDPNLQNIPTRTEEGKQIRKAFVPTDPDGYIF
SCDYSQVELRVLAHVSGDAHMQEAFKTGYDIHSHTAMKIFHLDSPDEVTPLMRRHAKAVN
FGIVYGISDYGLSKNLGISRKQAKEFINNYFEQYPQIKDYMDKAVQEARDKGYAETIMHR
RRYLPDIHAKKYTVRAFAERTAINSPIQGSAADIIKIAMINMQKKLDELHLKTKMVVQVH
DELIFDVPKDELETIKKIVPEVMQSAVKLDVPLIADSGWGHNWYDAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaaaattacttttaattgatggtaactcagtagcttttagagccttttat
gcgctttatcgtcagctagaatctttcaaaaatcctgaaggtttgcataccaatgcgatt
tatgcttttaaaaatatgttggacgtcttattaaaagatgttgaaccaaccaacgtctta
gttgcgtttgatgcaggcaaggtaacctttaggaccaagatgtacagtgattataagggt
ggtcgagccaaaacgcctgaagaattgcttgaacaaatgccttatatccaagaactgttg
catgatttgggtattaaaacctatgaactaaaagattatgaagccgatgacatcattggt
acttttgttcaaaagggtgaagatgctggctttactactactgtagttaccggtgaccgc
gacctaactcagttagcatcagataagacaacagttgaagtaactaaatctggcgtttct
caacttgaagcctatacgccagaacacatgaaagaagttaatggcgtgaccccaactgaa
tttatcgacatgaaggccttgatgggcgataattccgataattatcctggtgtcactaag
gttggtcccaagactgcttctcgtttgattcaaaaatatggttcagtagaagatctctat
gaacatgttgatgaaatgaagaagtctaagttgaaggaaaatctgatcaatgataaggat
aaggcctttttagctaagaaactagctaccattgatcgtgattcaccagtaacgattggt
atcgacgacgttaagcgtgaaccagttgattatgaaaaactgcgccaattctacgagcag
atgaactttcgtaagtttttggccgacttgaatgcttcaggcaaaggtcaagcagctact
gaagtggaaaaagttgaatataccgttttaaatgatcaaaatgttaaagatattaaggct
agtgaaaacgatcaagttgaattctacttagccatgctcggtgccaactatcatttagcg
gattttgtcggctttagcttgaagatcaatgatcagatttacgtttcaagggatgtcgat
ttacttagtgaagacaatttgaagcatcttttggaagatgaaaagatcaagaaaaatgtc
tttgatttaaagcggaccacggttggtttaaatcgcttaggcattcatgcccatggtttg
gactacgatatgcttttagcttcatacttggttaataatgaaaacaactccaatgattta
ggcgaaattgcgcatttatatggtgattactctgttaaaaccgatatcgaagtttatggt
aaaggcaagagtgaacatgttccagatgaagacgatgacttattcaaccacttggcttcc
aaagtaaatgtcatcgccaaattaaaagaaccgctattgcagaagttgaaggaacatgaa
caagatgacttgtttgatacaattgagattccaacggctcgcgttttagctaaaatggaa
atgaatggcatgaaggtggaggccagcaccttgattcagttgcagaatgagtttgccgtt
aagttaaaagaactggaagacaagatttaccagcaagctggggaacgttttaatttgaat
tcacctaagcaattaggccatatcttgtttgaaaaattaaacttgccagttttaaagaaa
accaaaacaggttactcaacttcggttgaggtgcttgatcaattgaagacgcaaagtcca
attgtcagtgagattttggattatcgtcagattgccaaaattcagtcaacctatgttaaa
ggtttgcttgatgtcatccaacctgatggtcgcgtacatacgcgttacttgcagacttta
acggcaaccggacgtttatctagtgttgatcctaacttgcaaaatattccaacgcgtact
gaggaaggtaagcaaatcagaaaggcctttgtgccaaccgaccctgatggttatattttc
tcttgtgactattcacaggttgaacttcgtgtattggctcatgtttctggggatgctcat
atgcaagaggccttcaagaccggctatgatattcactcgcacacggcgatgaagattttc
cacttggattcaccagacgaagtaactccattaatgcggcgacatgctaaggccgttaac
ttcggaattgtttatggtatttctgattatggtttgtctaaaaatttaggtatctctaga
aagcaagccaaagaatttattaacaattactttgaacagtatccgcaaattaaggactat
atggataaggctgtgcaagaggcacgcgacaagggctatgctgaaacgatcatgcaccgg
cgcagatatttgcccgatattcatgctaagaaatacactgtccgtgcttttgccgagaga
accgcgattaactcgccaattcagggttcagcggccgatatcatcaagattgcgatgatc
aatatgcaaaagaagctggatgaacttcatctgaagaccaagatggtagtacaggtgcac
gatgaattgattttcgatgtgccaaaggatgaactagaaacgattaaaaagattgtccct
gaagttatgcaatcagcagttaaacttgatgtgccactgattgctgattctggctgggga
cacaattggtatgatgcaaagtag
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