Lactococcus lactis subsp. lactis Il1403: L7894
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Entry
L7894 CDS
T00045
Symbol
rgpF
Name
(GenBank) polysaccharide biosynthesis protein
KO
K07272
rhamnosyltransferase [EC:2.4.1.-]
Organism
lla
Lactococcus lactis subsp. lactis Il1403
Brite
KEGG Orthology (KO) [BR:
lla00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
lla01005
]
L7894 (rgpF)
Lipopolysaccharide biosynthesis proteins [BR:
lla01005
]
O-antigen repeat unit
L7894 (rgpF)
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Gene cluster
GFIT
Motif
Pfam:
RgpF
Motif
Other DBs
NCBI-ProteinID:
AAK04305
UniProt:
Q9CIZ9
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Position
207900..209669
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AA seq
589 aa
AA seq
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MKRLLLYVHFNKNNKVSDHVIYQLKHMRSLFEKVIFISNSELSEQYQQQLVDFVDEFIQR
ENKGFDFAAWRDGMEQVGFDQLKMYDSVTLMNDTCFGPLYEMAPIYEKYEIQNIDFWGIT
NHRAYHESKNHYFDEHIQSYYKVFNNNVINSQIFEDFWKNIVDYTNVQDVIDHYEIQSTK
IFMDAGFKYESVLDTRALDAKNLLHPDFSYYAPDVILKEKVPFIKVKAFQSIQSNGIAYY
MLDYIDRNTDYPKSLVVDHLSTVGYPDLNFLLPSKMITPLSKTVLHQTVAVHLHVYYPEL
LEEFLDAFKNFSFDYDLYLTTNTDEKEEIIKEMLKCKDAKAKLVRTPNHGRDIVPFLALK
EELKKYDIVGHFHTKRSLEAAFFAGESWRTELISMLIEPADNIMAHFEQKQKLGIVIADI
PSFFRFNKIVNADNENKQIAPIMNDIWKRMKMNKKVNFHDFNTFTMSYGTFFWAKIEVLE
PLFNLEIMDREIPNEPLPQNTILHAIERVLIYLAWDKEMDFNISPNKLNLTPFIDSRTLN
QRFYISPENSDDIRLRYVLALSIKKLKRLIVYRFYKLFKLDTTKLFLKE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgccttttattatacgtccatttcaataaaaacaataaagtaagtgaccatgtt
atttatcaactaaaacatatgagaagtttatttgaaaaagtaatttttatctcaaacagt
gagttatcagaacaatatcaacaacaacttgttgactttgttgatgagttcattcaacgt
gaaaataaaggttttgacttcgctgcttggcgtgatgggatggagcaagtagggtttgac
caattaaagatgtatgattcggttacactgatgaatgacacttgttttggtcctctttat
gaaatggcccctatttatgaaaagtatgaaatacaaaatattgatttttgggggataaca
aatcatcgtgcctatcatgaatcaaaaaatcactatttcgatgagcatattcagtcttat
tacaaagtattcaacaataatgttattaattcacagatctttgaagatttttggaaaaat
attgttgattatacgaatgttcaagatgttattgaccattacgaaattcaatctacaaaa
atttttatggatgctgggtttaaatatgaatctgttcttgatacaagggctctagatgca
aaaaatcttttgcatccagatttttcttattatgcaccagatgtaatccttaaagaaaaa
gtaccctttattaaagttaaagcgttccaaagcattcaaagcaatggtattgcttattat
atgctggactatattgatagaaacaccgactatccaaaatcacttgttgttgatcatctc
agtacagttggttatccagatttaaattttttattgccaagtaaaatgattacaccgtta
tcaaaaactgttcttcaccaaactgttgcagtgcatttgcatgtatattatccagaatta
cttgaagaatttttagacgcctttaaaaacttttcgtttgattatgatttgtatctaaca
actaatacagatgaaaaagaagaaattattaaagaaatgttaaagtgtaaggatgccaag
gctaagcttgtcaggacacctaatcatgggcgtgatatagtgccgtttttagcacttaaa
gaagaattaaaaaaatatgatattgttggtcattttcatacaaagcgctccttagaggct
gccttttttgcaggggaatcttggagaactgagttaatatcaatgttgattgaacctgct
gataacattatggcacattttgagcaaaaacaaaaattaggaatcgtgattgctgatatt
ccaagtttctttaggtttaacaaaattgtcaatgctgacaatgaaaataaacagattgct
cctattatgaatgatatctggaaaagaatgaaaatgaataagaaagtcaattttcatgat
tttaatacatttacaatgagttatgggacatttttttgggctaaaatagaagttcttgaa
cctttatttaatttagaaataatggatcgagaaattccaaatgaacccctgccccaaaat
acaattttgcatgcgattgaacgggtgctaatttatcttgcatgggacaaagaaatggac
ttcaatatcagcccaaataaattgaatcttactccatttattgactcacgaactttaaac
caacgtttttatattagccctgaaaattcagatgatataagattacgatatgttttggct
ctttcaataaagaaattaaaaagattaattgtttataggttttataaattatttaaattg
gatacaacaaagctatttttgaaagagtga
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