Lactococcus lactis subsp. cremoris NZ9000: LLNZ_01935
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Entry
LLNZ_01935 CDS
T02131
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
lln
Lactococcus lactis subsp. cremoris NZ9000
Pathway
lln03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LLNZ_01935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lln03019
]
LLNZ_01935
03009 Ribosome biogenesis [BR:
lln03009
]
LLNZ_01935
Enzymes [BR:
lln01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
LLNZ_01935
Messenger RNA biogenesis [BR:
lln03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LLNZ_01935
Ribosome biogenesis [BR:
lln03009
]
Prokaryotic type
rRNA helicases
LLNZ_01935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ADJ59389
LinkDB
All DBs
Position
361169..362824
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AA seq
551 aa
AA seq
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MKFSELGLSEGIVKTLTEIGYEQPTPIQEETIKLALEGRDVLGQAQTGTGKTAAFGLPTI
EKINAENPAIQALVIAPTRELAVQGQEELFRFGKSKGLKVRTVFGGSSIEKQIKGLKAGA
HIVVGTPGRLVDLIKRKAIKLDQLETLILDEADEMLNMGFLEDIHFIIEKTPENRQTLLF
SATMPADIKKIGVKFMKNPEHIKIAAKEMTADRIDQYFVKTKEFEKFDVLTRLLDVERPE
LAIVFGRTKRRVDELIRGLKLRGYRAEGMHGDLDQNKRLAVLRDFKAGHIDVLVATDVAA
RGLDVSGVTHVYNYDITQDQESYVHRIGRTGRAGKSGRSVTFVSYNEMGYLRAIEKLTNK
EMKGLKPPTKEEAYQASLSVAMDDVLRDLSDESGKAKLAKFDKQAASLLEKFDAKELVAL
LLQGRVKDPDNQEEVKITAERPLPYNGEGKGFKKKGKGGGGRYKGRGNGDRDGNRDGNRG
GYRGNRDSKDGERGGDRKRNWKDRDDNRGGYREKRDDRRFDDRKQGEKTPRKRTTGTEKS
AGFVMRSRGDK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttagtgaactcggcctgtcagaaggaatcgtaaaaacacttacagagattggt
tatgaacaacctacaccaatccaagaagaaacaattaaattggcgcttgaaggacgtgac
gttcttggtcaagcgcaaacagggactggtaaaacagcggcatttggtcttcctactatt
gagaaaatcaatgctgaaaatccagccattcaagcacttgttattgctccaacccgtgaa
cttgcagttcaaggacaagaagaacttttccgttttggtaaatcaaaaggacttaaagtt
cgtactgtattcggtggttcaagtattgaaaaacaaatcaaaggacttaaagctggcgca
catatcgttgtgggaacaccaggtcgtttggttgacttgattaaacgtaaagcaatcaaa
cttgaccaacttgaaactttgattcttgatgaagcagatgaaatgcttaacatgggattt
ttggaagacattcattttattattgaaaaaacaccagaaaatcgtcaaacattgcttttc
tcagcaacaatgcctgctgatatcaaaaaaattggtgtgaaattcatgaagaatcctgaa
cacatcaaaattgcagccaaagaaatgactgctgaccgtattgaccaatactttgtgaaa
acaaaagaatttgaaaaatttgatgttttgactcgtttgcttgatgttgaacgtccagaa
cttgccattgttttcggtcgtacaaaacgccgcgttgacgaattgattcgtggtcttaaa
ttacgcggatatcgtgctgaaggaatgcacggagatttggatcaaaacaaacgtttggcc
gttttacgtgatttcaaagctggacatattgatgtcttggttgctactgacgttgccgct
cgtgggcttgacgtatcaggtgtaacacacgtttacaactacgatattacccaagaccaa
gaaagctatgttcaccgtatcggacgtacaggtcgtgctggtaaatcaggccgctcagta
acttttgtttcatacaatgaaatgggctaccttcgtgccattgaaaaattgacaaacaaa
gaaatgaaaggcttgaaaccaccaacaaaagaagaagcttaccaagcgtcactttctgtt
gcgatggatgatgttcttcgtgatttgtctgatgaatcaggtaaagcaaaattagcaaaa
tttgacaaacaagcagcaagcttacttgaaaaatttgatgctaaagaattggttgcctta
cttctccaaggacgtgttaaagaccctgataaccaagaagaagttaaaattacagccgaa
cgtccattaccatacaatggtgaaggaaaaggattcaagaaaaaaggtaaaggtggcggc
ggacgctacaaaggccgtggaaatggcgaccgtgatggtaatcgtgacggaaaccgtgga
ggctaccgtggtaatcgtgattctaaagatggcgaacgcggtggagatcgtaaacgtaac
tggaaagaccgtgatgacaatcgtggaggttaccgtgaaaaacgtgatgatcgtcgcttt
gacgaccgtaaacaaggtgaaaaaactcctcgtaaacgtaccacaggaactgaaaaatca
gctggcttcgtaatgcgtagccgtggcgataaataa
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