Lactococcus lactis subsp. lactis CV56: CVCAS_pB0004
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Entry
CVCAS_pB0004 CDS
T01964
Symbol
hsdM
Name
(GenBank) type I restriction-modification system, M subunit
KO
K03427
type I restriction enzyme M protein [EC:
2.1.1.72
]
Organism
llt
Lactococcus lactis subsp. lactis CV56
Brite
KEGG Orthology (KO) [BR:
llt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
llt02048
]
CVCAS_pB0004 (hsdM)
Enzymes [BR:
llt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.72 site-specific DNA-methyltransferase (adenine-specific)
CVCAS_pB0004 (hsdM)
Prokaryotic defense system [BR:
llt02048
]
Restriction and modification system (R-M system)
Type I R-M system
CVCAS_pB0004 (hsdM)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
N6_Mtase
HsdM_N
Eco57I
MTS
AviRa
Motif
Other DBs
NCBI-ProteinID:
ADZ65012
LinkDB
All DBs
Position
pCV56B:5210..6805
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AA seq
531 aa
AA seq
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MATGLNQQLWASADILRGKMDASEYKNYLLGLIFYKYLSDAQLREVYEQENGKTDTFPER
STQYAGFMEWYEEDKDDLIENIQPKQGYFIQPDQLFYHYRIKADNYEFNLTDLQAGFNEL
ERQGEEFSGLFADIDLNSTKLGSNAQQRNVTITEVLRALDEIDLFEHNGDVIGDAYEYLI
GMFAAGAGKKAGEFYTPQAVSRIMSEITSIGQESRAPFHIYDPAMGSGSLMLNIRRYLIN
PNQVHYHGQELNTTTFNLARMNLILHGVDKERMNLNNGDTLDADWPSEEPYQFDSVVMNP
PYSAKWSAADKFLSDPRFERFGKLAPKSKADFAFLLHGFYHLKESGTMGIVLPHGVLFRG
AAEGTIRQALLEMGAIDAVIGLPANIFFGTSIPTTVIILKKNRSRRDVLFIDASQDFEKQ
KNQNVLLDEHIDKIVSTYKKREDIERYAHVASFDEIQENDFNLNIPRYVDTFEEEEPVDL
VAVNTNLLKINEELVQQEQVLLSLIDNFSESEENQALIESMRLLLRGGHDE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggtttaaatcaacaactatgggcttctgcggatatcttacgtgggaagatg
gatgcaagtgagtacaaaaactacttactgggattaattttctataagtacttgtctgat
gcgcagcttagagaagtttatgaacaagaaaatggaaaaacagataccttcccagaacgt
tccactcagtatgcaggattcatggagtggtacgaagaagacaaagacgatttaatcgaa
aatatccaacccaaacaaggctactttatccaacccgatcaattgttttatcactaccgc
atcaaagctgataactatgaatttaacttgaccgacttacaagcaggttttaatgagttg
gaacgtcaaggagaagaatttagtggattgtttgcggatattgatttaaactccacaaaa
ttaggctcaaatgcacaacaacgtaatgtgacgattactgaggttttacgtgccttagat
gagattgacttatttgaacacaatggcgatgtcattggagatgcttatgagtatttaatc
gggatgtttgcggcaggtgcaggtaaaaaagcaggagagttttatacccctcaagctgtt
tcacgcatcatgtcagaaattacgtcgatcggacaagaatctcgagcgccttttcatatt
tacgaccctgcgatgggttcaggttctttgatgcttaatatccgtcgctatctcatcaac
ccaaatcaagtccattatcatggccaagagctaaatacgacgacctttaacttagcgcgt
atgaacttaatccttcatggagtagataaagaacgcatgaacctgaataacggggacact
ttagacgccgattggccgtcagaagagccttatcagtttgattctgtggtcatgaaccct
ccttactctgcgaaatggtcagcggcagataagtttctctctgaccctcgttttgagcgt
tttggaaaattagcgcctaaatctaaagcggactttgcctttctccttcacggtttttac
catttgaaagaatcgggaacaatggggattgtcctgcctcatggcgtgctctttagagga
gccgcagaaggaaccatccgtcaagctcttttagagatgggagctattgatgcagtcatt
ggcttgccggccaatatcttttttggaaccagtattccgacaacggttattattttgaag
aaaaaccgctctcgtcgcgatgtcttgtttatcgatgcttctcaagattttgaaaaacaa
aaaaatcaaaatgtcctgttggatgaacatattgataaaattgtttctacctacaaaaag
cgagaagatattgaaagatatgctcatgttgcaagttttgatgagatccaagaaaatgac
tttaacttaaatatccctcgttatgtcgatacctttgaggaagaggaaccggttgatttg
gttgcagtaaataccaatctccttaagatcaatgaagaattagttcaacaagagcaagtg
ctcttatcgttgattgacaatttttcagaaagtgaagagaatcaagccttgattgaatcg
atgcgtcttcttttgagaggcggtcatgatgagtaa
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