KEGG   Labilithrix luteola: AKJ09_05332Help
Entry
AKJ09_05332       CDS       T04033                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
llu  Labilithrix luteola
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:llu00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    AKJ09_05332
Enzymes [BR:llu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AKJ09_05332
DNA repair and recombination proteins [BR:llu03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     AKJ09_05332
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
5509084..5510892
Genome map
AA seq 602 aa AA seqDB search
MTPTGAEKLAAELSAPVGEVDGRKIAPMLLAPGDDGSRHFGQPGWTYELKLDGARILADK
RGKRTALTYRKLRDATESYPEIVEAVSKLAEERVVLDGEVVAFDEAGKPDFERLGQRITV
GSGGVRRAMMAVPVVFIVFDILAIGDRDLRRLPIEARRAILERVVPAEGPKDALVRLHPS
FDDGAALFSLCRQHALEGVVAKRNGSIYRVGERSLDWVKIKCELEADFVVVGYTEGEGNR
SHFGALLLASYDNGKLVARGRAGSGLDERMIATLLPRLKAIEVKGLLAEGKFSTPRKQHF
VKPEIVVSIRYMSFSSDGALKHPVFRGVRPDVDPEECTTNPDSPAEPAKPRKAERSTKSA
SIIPEAALEKDEVCTYYEHVGSRLLPWLRGRPCLPLRFDPKSGVSSATWPLPRSTPASVR
TSASAPGMLIDQLSDLRVVVDLGAGSIAVPAKSDFIAIHAKADGVVGRFRELASAVGLPS
LVKTSGVAGYDLLLALGPLPRAAVQTFGELVLQLVRGDDEASLLDTVVPPWALVFERGIV
TASLPLDENELLSPSARGLKDARARAEAGHGADAAAFDARAIDPAKAVAALERIVAARGG
SR
NT seq 1809 nt NT seq  +upstreamnt  +downstreamnt
atgacgccgaccggggccgagaagctggctgccgagctctccgcccccgtcggcgaagtg
gacggtcgcaagatcgcgcccatgctcctcgcaccgggcgacgacggctcgcgccacttc
ggtcagccgggctggacctacgagctgaagctcgacggcgcgcgcatcctcgccgacaag
cgcgggaagcgaacggcgctcacgtatcgcaagcttcgcgacgccacggagagctatccg
gagatcgtcgaagcggtgagcaagttggccgaagagcgcgtggtgctcgacggcgaggtg
gtcgccttcgacgaagccggcaagccggacttcgagcgcctcggccagcgcatcaccgtg
ggaagcggcggcgttcgtcgcgcgatgatggcggtgcccgtcgtcttcatcgtgttcgac
atcctcgccatcggcgatcgtgacttgcggcgtcttcccatcgaagcgcgcagggcgatt
ctcgaacgcgtggttccggccgagggccccaaagacgcgctcgtgcgactgcatccgagc
ttcgacgatggggccgcgctcttctcgctgtgccggcagcacgctctcgagggcgtggtc
gccaaacgtaacggctcgatctaccgcgtcggcgagcgctcgctcgactgggtgaagatc
aaatgcgagctggaggcggacttcgtcgtcgtcggctacaccgaaggcgaggggaaccgc
tcgcatttcggtgcgctcctcctcgcgtcgtacgacaacggcaagctcgtggcgcgtggc
cgagcgggcagcgggctcgacgagcggatgatcgcaacgttgctgccgcgcctgaaggcc
atcgaggtgaagggcctgctcgcggaagggaagttctcgaccccacgaaagcagcatttc
gtgaagccggagatcgtcgtctcgattcgctacatgagcttctcgagcgacggtgcactc
aagcatcccgtgttccgcggcgtgcgacccgacgtggatcccgaggaatgcaccacgaat
ccggactcgcccgccgagccggcgaagcctcgcaaggccgagcgatccacgaagagcgca
tcgatcatccccgaggctgccctcgagaaggatgaggtgtgcacctattacgagcacgtt
ggttcgcgcctcttgccgtggctccgcgggcgtccctgccttccgctccgcttcgatccg
aagtcgggcgtgtcgagtgcgacctggccgcttcctcggtcgacaccggcgagtgtgcga
acgtccgcatcggctcccggaatgcttatcgatcagctctccgatctccgcgtcgtcgtc
gacctgggggccggttcgatcgccgtgccggccaagagcgacttcatcgcgattcacgcc
aaggcggacggcgtcgttggtcgcttccgcgagcttgcgtcggccgtcgggctgccgtcg
ctcgtgaagacgtcgggcgtggcggggtacgatctgctgctcgcgctcggcccgttgccg
cgtgccgccgtccagacgttcggcgagctcgtcctgcagctcgtccgtggtgatgacgag
gcgagcttgctcgacacggtcgttccgccgtgggcgctggtcttcgagcgagggatcgtc
accgcctctctcccgctcgacgaaaatgagctcctttccccgtcagcgcgcggcctgaaa
gacgcccgcgctcgggccgaggcaggccacggggccgacgcggcagcgttcgatgcacgc
gcgatcgacccggcgaaagcggtcgctgcgctcgagcggatcgtcgcggcacgaggcggc
tcgcgctaa

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