Listeria monocytogenes serotype 4b LL195: BN389_15990
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Entry
BN389_15990 CDS
T02416
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmog
Listeria monocytogenes serotype 4b LL195
Pathway
lmog03030
DNA replication
lmog03430
Mismatch repair
lmog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BN389_15990 (dnaE)
03430 Mismatch repair
BN389_15990 (dnaE)
03440 Homologous recombination
BN389_15990 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmog03032
]
BN389_15990 (dnaE)
03400 DNA repair and recombination proteins [BR:
lmog03400
]
BN389_15990 (dnaE)
Enzymes [BR:
lmog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BN389_15990 (dnaE)
DNA replication proteins [BR:
lmog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BN389_15990 (dnaE)
DNA repair and recombination proteins [BR:
lmog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BN389_15990 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
Transcrip_reg
Motif
Other DBs
NCBI-ProteinID:
CCO64173
UniProt:
A0A0E1R788
LinkDB
All DBs
Position
complement(1593204..1596548)
Genome browser
AA seq
1114 aa
AA seq
DB search
MKGERIVGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKC
LAADIKPIIGMTVTIQGYLNPINSYELILIAESTAGYHELLKIASAIQTREEGPELPQSW
LRAYSSNLIAISPGAKGEIERLLMEENREGALEVYANLVEIFGKESVYLSAQKENPRLFT
KIETFSAEENVPVVATKNVQYIEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQED
MERDWQTEFEKRACLETGELADRCHVEIALDQHLLPRFPLNEGQNASDVLRQTAFAGLKE
RNLLGVEYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGILTGPGRGSAAGSLVSYA
LRITDVDPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTF
GTLAAKAAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEM
IWEVACQLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKM
DFLGLRNLSLLDRVLKSVNYTRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRR
VLRKLKPTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLAPILEVTYGVIV
YQEQIIQVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSRGYSDASANQVY
DMIVQFANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAK
NYGISMLAPSINHSNYYFQVENESSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFC
ERMPHKMLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDD
DFLKKMKPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGK
NYQVAAYVHEVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQV
KADTRNGELQLIINKAEDLKEIKAPVRLFLKLTEPQQMEQIKPVLTRYKGDSKVIVHQAI
TKQTAELKNIQVTPSNELQEALEELLGKENVVIK
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaggagagaggatagtggggtttgttcatttacaagttgcgagcgcttatgatttg
ctttcaagtacagcatcgattgataagctaatcgctaaagcaaaagaataccattatcca
gccttagcaattacggataaaaatgtactttacggagtagtcgagttttatcaaaagtgt
ttagcggcggatataaaaccaattatcgggatgacggtgacaattcaaggttacttaaat
ccaattaattcatatgagttgatattaattgcggaatcaaccgctggatatcacgagtta
ttaaaaatcgcgagtgctattcaaacgcgcgaagaaggccccgaattgccacaaagctgg
ttacgcgcttatagcagtaacttgattgcgatttcacctggtgccaaaggagaaatcgaa
cgtcttctgatggaggagaatcgcgagggagcactggaagtttatgcaaatttagtcgaa
atttttggtaaagaatctgtttatttatctgcccaaaaagaaaatccacgtcttttcaca
aaaatagaaactttttctgcagaagaaaatgtaccggttgttgcgacgaaaaatgtacaa
tatatagaaccaaaagatgcgcaagcaaaagaagttttaacggccattcgtgataatcga
acggtcgattggacaacgttaccacttgctggaccaaattattttacctcacaagaagac
atggaacgtgattggcaaacggagttcgaaaaacgggcatgcttagaaactggtgaactt
gcagatcgttgtcatgtcgaaattgctttggatcagcatttattacctagatttccatta
aatgaaggacaaaatgcatcagatgttttgcgtcaaacagcctttgcaggattaaaagaa
cgaaatttattaggtgtggaatatcaggagcgtttagaatatgaattaaaagtcattacg
gaaatgggttttgcagattactttctaatcgtttgggatgttattcgttattcacgcgag
gcgggaattttaacaggtccaggtcggggctctgcggcggggtcgcttgtttcctatgca
ctcagaattacggatgtagacccaattcgttacaatttgctatttgaacgatttttaaac
ccagaacgtatcacgatgcccgatattgatttggattttccagataatcgccgggatgaa
gtgatttcgtatgtggtatctaaatacggagaagcgcatgtggcgcaaatcggcacgttt
ggaacactagcggcaaaagcggcgattcgcgatactgcgaggagttttgggctaaattct
gtactattatctgaatggtctaagttgattccaagtcagttaggtattacgttacaaaaa
gcactacaagaaagtccgcgtttagaaaaccatattaaaagctctaaagaaaatgaaatg
atttgggaagttgcttgtcaactggaaggcttgccacgtcatatttcaacgcacgcagcg
ggaatagttattagtgacaagccactcgtagaacaagtcgcgctacaattaggtagcgga
gatgcacgtttgacccagtttgctatgggagaattagagaaaatcggcttacttaaaatg
gactttttaggacttagaaatcttagtttacttgatcgtgttttgaaatcagtcaattat
actagagaaactccgttaacattagcagatatttccttagaagataaaaaaacattgaaa
ctattccaaacaggtgacacgacaggggtattccaatttgaatcggacgggattcgacgc
gtgctccgaaaattaaaaccaacttcttttgaagatgtcgtggcggtagatgcgctttat
cgtccgggtccaatggaacaaattgatacatttatcgctagaaaacacggaaaagaaaaa
attcaatatcctcatccagatttagcgcctattttggaagtgacatacggcgttatcgtt
tatcaagagcaaattattcaagtagcgaaccaaatggctggattttcgcttggagaagca
gatttattaagacgagcggtcagcaagaaaaaagcagatgtcctaaacgaagagcgaatt
cactttgtggaaggtgctaagagtagaggttattcagatgctagcgctaaccaagtgtat
gatatgattgttcaattcgcgaattacggtttcaaccgaagtcacgcagcagcatattca
aaaatcgcttttcaattagcttatttaaaagcacattttccagctgcatttatgtcgtcg
cttcttagctctgtttttggcaatgacgacaaaatttcccagtacattaccgaagcaaaa
aactacggaattagcatgttagcgccaagcatcaaccatagtaattactacttccaagtg
gagaatgaatcatctatccgctatagtttccgtgttattcgtaaagtgccaacgaaattc
attttagaaattattaacgaacgaaaaaaagcacctttccgagatttctttgatttttgt
gaaagaatgccacataaaatgctctcagaaaccgttttagaagcacttgtattttctggg
tgttttgacgaatttggcgaggatcgagcaacgattttggcaaccattgatgcagtgcta
caatatatttcgctactcggtgaagattcgaaaggaatgaatcttttcgcggaagatgat
gactttttgaaaaagatgaaaccacgctaccggaaaaccgcgcccatttcgattgatgaa
aagctggagaaagaaaaattatacacgggtcaatacgtttcagcgcatccagtatcgtac
taccaaaataaattacaaaatcttgctattacaagacttgcaaatctttcttccggcaaa
aactatcaagtagctgcttatgtacatgaagtcaaatcaattagaacaaaaaagggcgaa
acgatgtgctttttaacaattagtgatgattcaaaagaactgagcgccgtcatgttcccg
gaaagttatcgtaaattcgcgagctttgcacaaaaaggggagattctctttttgcaagtc
aaagcagacacaaggaacggagagctacagttaattatcaataaagcagaagatttaaaa
gaaataaaagcccccgtacgattgttcctaaaattaacggaaccacagcaaatggaacaa
attaagccagttttaacgcgttataaaggcgacagtaaggtcattgtgcatcaagcaata
acgaaacaaactgctgagctgaaaaatattcaagtaacgccatcaaatgagctgcaagaa
gcgttagaagagctactcggtaaagagaatgtagtcattaagtaa
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integrated database retrieval system