Listeria monocytogenes J1816 (serotype 4b): LM220_08575
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Entry
LM220_08575 CDS
T02776
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lmoj
Listeria monocytogenes J1816 (serotype 4b)
Pathway
lmoj03030
DNA replication
lmoj03430
Mismatch repair
lmoj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmoj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LM220_08575
03430 Mismatch repair
LM220_08575
03440 Homologous recombination
LM220_08575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmoj03032
]
LM220_08575
03400 DNA repair and recombination proteins [BR:
lmoj03400
]
LM220_08575
Enzymes [BR:
lmoj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LM220_08575
DNA replication proteins [BR:
lmoj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LM220_08575
DNA repair and recombination proteins [BR:
lmoj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LM220_08575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_30
AAA_5
AAA_22
AAA_assoc_2
AAA_19
AAA_24
TIP49
PIF1
AAA_16
AAA_7
Mg_chelatase
AAA_14
AAA_2
Bap31_Bap29_C
Rad17
DnaX_C
B12-binding_2
nSTAND3
DUF815
AAA_18
T2SSE
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
EGF40505
LinkDB
All DBs
Position
1298818..1300557
Genome browser
AA seq
579 aa
AA seq
DB search
MAYQALYRIFRPQSFQDVVGQEHVTKTLKNAIVQNKTSHAYLFSGPRGTGKTSAAKIFAK
AINCEHGHDGEPCNECEICKGTTDGSIPDVLEIDAASNNGVEEIRDIREKVKYAPTVAKY
KVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPHKLPLTIISRVQRFDFKRITT
QDIIGRLKFILEEEKIPYDEKALMIVARAAEGGMRDALSLLDQVISYGSEEVAVEDALEI
TGSVAQNLLTKLVSAAFDGDAAEAISTLTALLAEGKDPVRLVEDLLVFFRDVLLYQKAPN
LEETLERALIDDDFVALAKRADSLKVYEFVKILNTAQQQMRFSNHPGIYVEVALVQLTQA
GKSVAGGGNVPADAASGSDVSDLKRQMEQMHQEIQTLKKQIASGAGAAPADKPTQNRGGS
KKAINNGKQFKAPIGKINHVLGEAKKENLQLIRGCWGELLSMLMASQAALLNDAEPVAAS
QDTFVLKFKHEIHCQMAMDNPNFVETITSSIARLTQVNYTFIGIPEDQWADVRENFLHSH
GSDGDAEDGANPEAKKPAEDPFVAEAAKLVGEDLLEIKD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcaggctttgtatcggatttttcggccgcagtcgtttcaggatgttgttgga
caggaacatgtgacgaaaacgcttaaaaatgccattgtgcaaaataaaacttcgcacgct
tatttattttctgggcctcgggggacggggaagactagtgcggcgaaaatttttgcgaag
gcgattaactgtgaacacggccatgacggggagccttgcaatgaatgtgagatttgtaaa
ggtacgacggacggttctataccagatgttcttgaaatcgatgctgccagtaataacggg
gttgaagaaattcgagatatccgggaaaaagtaaaatatgcgccaactgtggcgaaatat
aaagtatatattatcgatgaagtgcatatgttgtcgacgggagcgtttaatgcgctacta
aaaacgctggaagaaccgccgaaacatgtcatttttattttggcaacaacagaaccgcat
aagttaccgctaacgattatttcgcgggtacaacggtttgattttaaacgaatcacgaca
caagatattattggtcgtttgaaatttattttggaagaagaaaaaatcccttatgatgaa
aaagcgttgatgattgttgcgcgtgcggctgaaggtggaatgcgtgatgcgcttagtttg
ctcgatcaagttatatcttacgggtcagaagaagttgcagtggaagacgcgctagaaata
acaggttcggttgctcaaaatctccttacaaaactagtaagtgcagcgtttgacggcgat
gcagcagaagcgatttcaacgctgacagcactgctagcagaagggaaagacccggttcgc
ttagtggaagatttactcgtattctttagagatgtgctgctgtatcaaaaagcgccgaat
ctggaagaaacactggaacgagctttgattgatgatgattttgttgctttggcaaaacga
gcagattcacttaaagtgtatgagttcgtgaaaattttaaatacagctcagcaacaaatg
cgtttctcgaatcatccgggtatttatgtggaagtggcgcttgttcagttaactcaggcg
ggtaaatcagttgcaggtggcgggaatgtgccagcagatgcagcttctggaagtgatgtc
tctgacttaaaacgtcaaatggagcaaatgcatcaagagatacaaacgctgaaaaaacaa
attgccagcggggctggagcagcgccagccgataaaccaacccaaaatcgcggtggttct
aaaaaagcaatcaacaacggcaagcaatttaaagcgcctattggtaaaatcaaccatgtg
ctaggtgaggctaagaaagagaatttacagttaatccgtggttgttggggcgagttatta
tcaatgttgatggcatctcaagcagcacttttaaatgacgcagaacctgtggctgcatct
caggacacttttgtgttaaaatttaagcatgagattcactgtcaaatggcgatggataat
ccgaactttgttgaaaccatcacatcgagtattgcccgactgactcaagtaaattatact
tttattggtatcccagaagatcaatgggctgacgtaagagagaatttcctgcatagtcat
ggtagcgacggcgatgcggaggacggcgcaaatccagaagctaaaaaaccagcggaagat
ccttttgttgcagaagccgcaaaactcgttggtgaagatttgcttgaaattaaagattaa
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