Listeria monocytogenes SLCC2376 (serotype 4c): LMOSLCC2376_1531
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Entry
LMOSLCC2376_1531 CDS
T02222
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lmon
Listeria monocytogenes SLCC2376 (serotype 4c)
Pathway
lmon03030
DNA replication
lmon03430
Mismatch repair
lmon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lmon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LMOSLCC2376_1531 (dnaE)
03430 Mismatch repair
LMOSLCC2376_1531 (dnaE)
03440 Homologous recombination
LMOSLCC2376_1531 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lmon03032
]
LMOSLCC2376_1531 (dnaE)
03400 DNA repair and recombination proteins [BR:
lmon03400
]
LMOSLCC2376_1531 (dnaE)
Enzymes [BR:
lmon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LMOSLCC2376_1531 (dnaE)
DNA replication proteins [BR:
lmon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LMOSLCC2376_1531 (dnaE)
DNA repair and recombination proteins [BR:
lmon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LMOSLCC2376_1531 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
POT1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CBY63563
LinkDB
All DBs
Position
complement(1560289..1563615)
Genome browser
AA seq
1108 aa
AA seq
DB search
MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVLYGVVEFYQKCLAADIK
PIIGMTVTIQGYLNPINSYELILIAESTAGYHELLKIASAIQTREEGPELPQSWLRAYSS
NLIAISPGAKGEIERLLMEENRDGALEAYANLVDIFGKESVYLSAQKENPRLFAKIETFS
AEENVPVVATKNVQYLEPKDAQAKEVLTAIRDNRTVDWTTLPLAGPNYFTSQEEMERDWQ
TDFEKRACLETGELAERCHVEIALDQHLLPRFPLKEGQNAPDVLRQTAYDGLKERDLLGA
EYQERLEYELKVITEMGFADYFLIVWDVIRYSREAGVLTGPGRGSAAGSLVSYALRITDV
DPIRYNLLFERFLNPERITMPDIDLDFPDNRRDEVISYVVSKYGEAHVAQIGTFGTLAAK
AAIRDTARSFGLNSVLLSEWSKLIPSQLGITLQKALQESPRLENHIKSSKENEMIWEVAC
QLEGLPRHISTHAAGIVISDKPLVEQVALQLGSGDARLTQFAMGELEKIGLLKMDFLGLR
NLSLLDRVLKSVNYNRETPLTLADISLEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLK
PTSFEDVVAVDALYRPGPMEQIDTFIARKHGKEKIQYPHPDLAPILEVTYGVIVYQEQII
QVANQMAGFSLGEADLLRRAVSKKKADVLNEERIHFVEGAKSKGYSDASANQVYDMIVQF
ANYGFNRSHAAAYSKIAFQLAYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISM
LAPSINHSNYYFQVENESSIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHK
MLSETVLEALVFSGCFDEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDEFLKKM
KPRYRKTAPISIDEKLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAA
YVHEVKSIRTKKGETMCFLTISDDSKELSAVMFPESYRKFANFAQKGEILFLQVKADTRN
GELQLIINKAEDLKEIKAPVRLFLKLTETQQMEQIKPILARYKGDSKVIVHQAVTKQTAE
LKNIQVSPSNELQEALVELLGKENVVIK
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
gtgggttttgttcatttacaagttgcgagcgcttatgatttgctttcaagtacagcatcg
attgataagctaatcgctaaagcaaaagaataccattatccagccttagcaattacggat
aaaaatgtgctttacggagtagtcgagttttatcaaaagtgtttagcggcggatataaaa
ccaattattgggatgacggtgacaattcaaggttacttaaatccaattaattcatatgag
ttgatattaattgcggaatcaaccgctggatatcacgagttattaaaaatcgcgagtgct
attcaaacgcgcgaagaaggaccagaattgccacaaagctggttacgcgcttatagcagt
aacttgattgcgatttcacctggtgccaaaggagaaatcgaacgtcttctgatggaagag
aatcgcgatggagcgctagaggcttacgcaaatttagtcgatatttttggcaaagaatcg
gtttatttatctgcgcaaaaagaaaatccgcgcctttttgcaaaaatagaaacattttct
gcagaagaaaatgtgcctgttgttgcgacaaaaaatgtacaatatttagagccaaaagat
gcacaagcaaaagaagttttaactgccattcgtgataatcgaacggtcgattggacaacg
ttaccacttgctggaccaaattatttcacctcacaagaagaaatggaacgtgattggcaa
acggatttcgaaaaacgggcatgcttagaaactggtgaacttgcagagcgttgtcatgtc
gaaattgctttggatcagcatttattacctagatttccattaaaggaaggacaaaatgca
ccagatgttttgcgtcaaacagcctatgatggcttaaaagaacgagatttactaggggcg
gaatatcaggagcgattagaatatgaattaaaagttattacggagatggggtttgccgat
tactttttaattgtttgggatgttattcgttattcgcgtgaggcgggagttttaacggga
ccaggtcggggttctgcggctgggtcacttgtttcctatgcactcagaattacggatgta
gatccgattcgatacaatttgctatttgaacgttttttaaacccagaacggattacgatg
cccgatatcgatttggattttccagataatcgccgagatgaagtgatttcgtatgtggta
tctaaatacggagaagcgcatgtggcgcaaatcggcacgtttgggacactggcggcaaaa
gcggcgattcgcgatactgcgaggagttttgggctaaattctgtactattatctgaatgg
tctaagttgattccaagtcagttaggtattacgttacaaaaagcactacaagaaagtcca
cgtttagaaaaccatattaaaagctctaaagaaaatgaaatgatttgggaagtagcttgt
caactggaaggcttgccacgtcatatttcaacgcacgcagccggaatagttattagcgac
aagccactcgttgaacaagttgcgctgcaattaggtagcggagatgcacgtttgactcag
tttgctatgggagaattagagaaaatcggcttacttaaaatggactttttaggacttaga
aatcttagtttactcgaccgcgttttaaaatcggttaactataatagagaaacgccatta
actttagcggatatctctttagaagataaaaaaacattaaaactattccaaacaggcgac
acgacaggtgtattccaatttgaatcggacgggattcgacgcgtactccgaaaattaaaa
ccaacttcttttgaagatgtcgtggcggtagatgcgctttaccgtccaggtccaatggaa
caaattgatacatttatcgctagaaaacacgggaaagaaaaaattcaatatcctcatcca
gatttagcgccgattttggaagtgacatacggcgttatcgtttatcaagagcaaattatt
caagtagcgaaccaaatggctggattttcacttggagaagcagatttattaagacgagcg
gtcagcaagaagaaagcagatgtcctaaacgaggagcgaattcactttgtagaaggtgct
aagagtaaaggttattcagatgctagcgctaaccaagtgtatgatatgattgttcaattc
gcgaattacggtttcaaccgaagtcacgcagcggcttattcaaaaatcgcttttcaatta
gcttatttaaaagcgcattttccagctgcatttatgtcgtcgcttcttagctctgttttt
ggcaatgacgacaaaatttctcagtacattaccgaagcaaaaaactacggaattagcatg
ttagcgccaagcatcaaccatagtaattactacttccaagtggagaatgaatcatctatc
cgctatagtttccgtgttattcgtaaagtcccgacgaaattcattttagaaattattaac
gaacgaaaaaaagcacctttccgagatttctttgatttttgtgaaagaatgccacataaa
atgctctcagaaaccgttttagaagcactcgtattttctggttgttttgacgaatttggt
gaagatcgagcaacgatattggcaactattgatgcagtgctacaatatatttcgctacta
ggtgaagactcaaaagggatgaatcttttcgcggaagatgatgagtttttgaaaaagatg
aaaccacgctatcggaaaaccgcgcccatttcgattgatgaaaagttggagaaagaaaaa
ttatacactggtcaatatgtttcagcgcatccagtatcgtattatcaaaacaaattacaa
aacctcgcaatcacaagacttgcaaatctttcttctggcaaaaattatcaagtagctgcc
tatgtacacgaagtaaaatcaattaggacaaaaaaaggcgaaacgatgtgctttttaaca
attagtgatgactccaaagaactgagtgcagtgatgttcccagaaagttaccgtaaattc
gctaattttgcacaaaaaggggaaatcctctttttgcaagtgaaagcagatacgagaaac
ggagaactccagttaattattaataaagcagaagatttaaaagaaattaaagccccagtt
agattatttttgaaattaacagaaacacagcaaatggagcaaattaaaccgattttagcg
cgttataaaggggatagtaaggttatcgtacatcaagcggtaacgaaacaaacagcagag
ctgaaaaatattcaagtatcgccatcaaacgagttacaagaagcgttagtagagctgctt
ggtaaagagaatgtagtcattaagtaa
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