Listeria monocytogenes WSLC1042 (serotype 4b): AX24_04655
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Entry
AX24_04655 CDS
T03151
Name
(GenBank) Zn-dependent hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
lmox
Listeria monocytogenes WSLC1042 (serotype 4b)
Pathway
lmox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lmox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AX24_04655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lmox03019
]
AX24_04655
Messenger RNA biogenesis [BR:
lmox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AX24_04655
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GFIT
Motif
Pfam:
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AHJ35500
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Position
complement(855080..856747)
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AA seq
555 aa
AA seq
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MTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPENELLGIDIVIPDFKYL
EENKDRVKAVFLTHGHEDAIGALPYLLQKIKAPVYGTELTIALAKSALKEHRKLRFKNFH
VVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIVYTGDFKFDQSAKDGYASDLS
HIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRHAFRMADGRIIVACVASNLIRLQ
QVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIEEDLIVPLKELKKYSDDEITIIETG
NLGEPIQSLQLMTKGNHPQFNIKPGDTVYITTTPSPSLETMMAKTMDMLYKAGAKVLTMS
NNLFISGHASQEDLKLMINLLKPRYFVPVHGEYRMLISHAKLAHEVGMAKSEVFIVGKGE
ILEYKNDKMTAGNRVYSGNTLIDGLGVGDVGNIVLRDRKLLSEDGIFIVVVTLNRKSKTI
TSGPEIISRGFIYVRESEHLIEESSKVVTKIVEKNLQETGFEWAKLKQDIRDQLNRYLFE
QTKRRPMILPIIMEV
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
ttgacaataaaaaaagcgaaaaacataaaaatcattccactcggcggtgtcgatgaaagt
ggcaaaaatttatatgtagtagaaatagacgaagatatctttatattagatgcgggctta
atgttcccagaaaatgaattactaggaattgatattgttattccagatttcaaatattta
gaagaaaataaagatcgtgtaaaagctgttttcctaacacacggtcacgaagatgcaatt
ggagcattgccatacttgcttcaaaaaatcaaagcaccagtttatggtacagaattaacg
atagcactggcaaaatcagcacttaaagaacaccgtaaactacgcttcaagaatttccat
gtcgttaacgaagaaacaactttatccttttcaaaaattgatgtttcctttttccgtaca
acgcacactattcctgattctgttgggattgttcttgaaacaagcgaaggatctattgtt
tatacaggggatttcaaattcgatcaatcagcgaaggacggctatgcttctgatttaagc
cacattgcagaatttggcgaaaaaggggtactagctttactttcagatagttcagaggct
gagcaccctggaacaacgtctagcgatagtttaattgaagaagaaattagacatgcgttc
cgaatggcagacggcagaattatcgtcgcttgtgtagcttctaatttaattcgcttacaa
caagtactcgatgcatccgttgcaaccaaacgtaaagtcgctattgttggtaaagaatta
gagcgcgttttcgaaattgctggcagtttaggtaaaatcgtcattgaagaagacttaatt
gttccgttaaaagaacttaaaaaatatagcgatgacgaaattactattattgaaacaggt
aatctaggagaaccaattcaatcattacaattaatgactaaaggaaatcatccacaattc
aacatcaaacctggtgatactgtttacattacgacgacgccatcaccatctcttgaaaca
atgatggctaaaacaatggatatgctctataaagcaggtgcgaaagtgctaactatgagc
aataatctattcatctctggccatgcaagtcaagaagacttaaaattaatgattaactta
ttaaaaccaagatattttgttccagttcacggagaatatcgcatgttaatcagtcacgct
aaattagctcatgaagttggtatggcaaaatcagaagtatttatcgtaggtaaaggtgaa
attttagaatataaaaatgataaaatgacagctggtaatcgcgtatactctggtaatact
ttaattgatggtttaggtgttggtgatgttggtaacatcgtgctacgcgaccgtaaattg
ctctcagaagacgggattttcattgttgtagtaacacttaatcgtaaatcaaaaaccatt
acttcaggaccagaaatcatttcacgtggctttatttatgtgagagaatcagaacatttg
attgaagaatcttccaaagttgttacaaaaattgttgaaaaaaatcttcaagaaaccggc
tttgaatgggcgaaattaaaacaagacattcgtgaccaattaaatcgctacttatttgaa
caaacaaaacgacgtccaatgattttaccaattattatggaagtctag
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