Listeria monocytogenes R479a (serotype 1/2a): LMR479A_1253
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Entry
LMR479A_1253 CDS
T03180
Symbol
mutSB
Name
(GenBank) putative DNA mismatch repair enzyme
KO
K07456
DNA mismatch repair protein MutS2
Organism
lmr
Listeria monocytogenes R479a (serotype 1/2a)
Pathway
lmr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LMR479A_1253 (mutSB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lmr03400
]
LMR479A_1253 (mutSB)
DNA repair and recombination proteins [BR:
lmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LMR479A_1253 (mutSB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
DivIVA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CDM16475
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All DBs
Position
1223696..1226053
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AA seq
785 aa
AA seq
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MEKKVEAILEFDKIKKQLTEFASSSLGEQAILELAPATDFQVVQKTQLETEEGAKIIRLR
GSAPITGLTDVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQMKNFMNDLLEIGVELPILG
ALSDELLVLKEVEEDIAISVDESGKVLDTASEALSTIRRTLRRTEDRVREKLESYLRDRN
ASKMLSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSASGQTLFIEPQSVVDLNNERKAL
QAKEKQEIERILAEISASLAAWINEIHHNTFILGRFDFIFAKARFGKAMKAVTPHLSDAG
VVHLIAARHPLLDAAKVVANDIYLGEDFTTIVITGPNTGGKTITLKTLGLLTLMAQSGLQ
IPAQEDSTIAVFEHVFADIGDEQSIEQSLSTFSSHMTNIVSILEKVNQKSLILYDELGAG
TDPQEGAALAIAILDASHEKGASVVATTHYPELKAYGYNRVHATNASVEFNVETLSPTYK
LLIGVPGRSNAFDISRRLGLSENIITEARSLVDTESADLNDMISSLEEKRNLAETEYEEA
RELARGADNLLKDLQKEITNYYQQKDKLIEQASEKAATIVEKAEAEAEEIIRELRTMQLN
GAAGIKEHELIDAKTRLGNAKPKTINKTIPQAPKQKPHVFQEGDNVRVLSLGQKGTLLNK
ISDKEWNVQIGIIKMKIKTADLEYIQPEKPKKQRIITSVHSSGSPAKSELDLRGERYEDA
LQKVDKYLDEALLAGYPQVAIIHGKGTGALRTGVTEYLKNHRMVKSIRFGAAAEGGNGVT
IVEFK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaagtagaagccattttagaatttgataaaataaaaaaacaactcaccgaa
tttgcttcttcgtcactaggggagcaagccattttagaactcgctccagcaactgatttt
caagtagttcaaaaaacgcaacttgaaacagaagaaggagccaagattattcgtttacgg
ggaagtgcgccaattactggtctaacagatgtttttgcacatttgaaacgtttagagatt
ggtggcgatttaaacgggctagaaatttaccaaataggtagtaacttgcgcgttagccgt
caaatgaagaattttatgaacgatttactggaaatcggtgtcgaattgcctatactcggg
gccctttcggatgaacttttagtactaaaagaagtagaagaggatattgcgatttcagta
gatgaaagcgggaaagtgttagatactgcgagtgaagcgcttagtacgattcgccgaaca
ctccgacgtaccgaagaccgcgtacgtgaaaaactagaatcttatttgcgcgatcgtaat
gcctctaaaatgttaagcgatgcggttattacaattcgaaatgatcgttatgttatccca
gttaaacaagaatacaaaggtcattatggtggtatcgttcatgaccagtctgcttccggt
caaacacttttcattgagccgcaaagtgtagtggatttaaataacgaacgaaaagcactt
caagcaaaggaaaaacaagaaatagaacgcattcttgctgaaatttctgcttctttagct
gcttggattaatgaaattcatcataatacattcatattagggcgctttgattttattttc
gcaaaagcacgtttcgggaaagcgatgaaagccgtaacaccgcatttgagtgatgctggt
gtcgtacatttaattgcggcacgacatccgctgttagatgctgcaaaagttgtggcgaat
gacatttatttaggggaagatttcactaccatcgttattactggtccaaacacaggtggt
aaaacaattactctaaaaacgttgggattactgacgctcatggcgcaatccggactgcaa
atcccagctcaagaagattctactattgctgtttttgagcatgtatttgccgatattgga
gacgaacaatccatcgaacaaagtttaagtacgttctcgtctcacatgacgaatattgtt
tccattttggaaaaggtaaatcagaaatcacttattttatatgatgaacttggggcagga
actgatccgcaagaaggagcggctctggccattgcaatacttgatgcgagtcacgaaaaa
ggcgcaagtgttgttgcaacgactcattatcctgaattaaaagcatatggttacaaccgt
gttcatgcaaccaatgcatctgttgagtttaatgtcgaaacacttagtccaacttacaaa
ttattaattggtgtacccggtcgaagtaatgcttttgatatttcacgccgcttaggatta
agcgaaaatattatcacagaagcaaggagccttgttgatactgaaagcgctgatttaaat
gatatgatttctagtctagaagaaaaacgaaatctagcagaaaccgaatatgaagaagcg
cgcgaattagctcgcggggctgataaccttttaaaagatttacaaaaagaaatcactaat
tattatcaacaaaaagataaattaatcgaacaagcgagtgaaaaagcggcaactattgtg
gaaaaagccgaagctgaggccgaagaaataatccgcgaattacgcaccatgcaattaaac
ggagcggcaggaatcaaagaacatgaacttatcgatgccaaaacaagacttgggaatgct
aaaccaaaaacaatcaacaaaaccatcccacaagcaccaaaacaaaagccacacgtattc
caagaaggagacaatgttcgagtcctctcacttggccaaaaaggcacacttttaaacaaa
attagcgataaagaatggaacgtccaaatcggcataatcaaaatgaaaatcaaaaccgct
gacttagaatatattcaaccagaaaaaccaaaaaaacaacgaatcattacatcggttcat
agtagtggttctccagctaaaagcgaactcgatttgcgcggcgaacgttacgaagatgct
ttgcaaaaagtcgacaaatacttggatgaagcactgctcgcaggatatcctcaagttgcc
attattcacggtaaaggaactggtgcccttagaactggcgtcacagagtatctgaaaaat
catcgcatggtcaaatcgattcgtttcggtgcagcagcagaaggcgggaacggcgtaacc
atcgttgagttcaagtaa
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