Limosilactobacillus oris: AYI71_05890
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Entry
AYI71_05890 CDS
T04391
Name
(GenBank) competence protein ComE
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
lor
Limosilactobacillus oris
Pathway
lor00240
Pyrimidine metabolism
lor01100
Metabolic pathways
lor01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
lor00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
AYI71_05890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lor02044
]
AYI71_05890
Enzymes [BR:
lor01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
AYI71_05890
Secretion system [BR:
lor02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
AYI71_05890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
Motif
Other DBs
NCBI-ProteinID:
AMS08360
LinkDB
All DBs
Position
complement(1199615..1200094)
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AA seq
159 aa
AA seq
DB search
MKKRIDWDQYFMVQAALLASRSTCTRLSVGAVLVRDKRIIGSGYNGAVAGDEHCIDVGCY
LRDGHCVRTIHAEMNALLQCAKFGTSTDGAMVYVTDFPCLQCTKSLLQAGITQINYLRNY
HNDDYAMKLIELKGVTLHQIKLDADILDQVNLDQYINPD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaagaattgattgggaccagtacttcatggttcaagccgccctgttggcatcc
cggagcacttgcacccgcttgtcagtgggggccgtgttggttcgcgacaaacggatcatc
ggctccggctataacggggcggtggctggtgatgagcactgcatcgacgtcggttgttac
ctgcgcgatggtcattgtgtgcggacgatccacgcggaaatgaacgcccttttgcagtgc
gccaagtttggcacctcgacggacggggcgatggtctacgtaactgacttcccgtgcttg
cagtgcacgaagagcctcttacaagccgggatcacccaaatcaattacctccgtaattac
cataacgatgattacgctatgaagttgattgagctaaagggcgtcacccttcaccaaatc
aaactagacgcagatatcttagaccaggttaacctcgaccaatacattaacccggactaa
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