Lactiplantibacillus plantarum B21: SH83_09180
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Entry
SH83_09180 CDS
T03680
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lpb
Lactiplantibacillus plantarum B21
Pathway
lpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SH83_09180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpb03400
]
SH83_09180
Enzymes [BR:
lpb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SH83_09180
DNA repair and recombination proteins [BR:
lpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SH83_09180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_4
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
HHH_5
AAA_28
Sigma54_activ_2
AAA_16
UvrD-helicase
nSTAND3
T2SSE
AAA_18
HTH_IclR
Mg_chelatase
AAA_29
AAA_23
TsaE
AAA
Motif
Other DBs
NCBI-ProteinID:
AJO74509
UniProt:
A0A166B0I5
LinkDB
All DBs
Position
complement(1980088..1982637)
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AA seq
849 aa
AA seq
DB search
MTDEQAHLFSDDIGREPVTHFIVGKVAAVFFSSADSFYKVLLVKVTEQNIDWSEDEIVVT
GNFADIQEETTYRFTGKTVTHPKYGVQFQADNYQNETPTTRAGLIAYLSGSDFPGLGKRT
AERIVDTLGEDAIDQILADPKVLKPIGLRASVQTTLIDTLTVNNGLEQTIIGLNAYGFGS
RLAAAIYARYQGDTLAKIQENPYCLVEDIKGVGFKKADQIAAQLKIDPQADDRLKAALLT
EINELCVENGDTYTTAQPLLNQTLQLLENARNVQIDPSKLADQLVVLAKENKIVGDENRI
YLRGLYEAEWRVAEHLQRLLAADNDEKLSERAVDHAIEHVGRASNITYDESQTEALKAAI
TAPVFLLTGGPGTGKTTIIRGLVALYAELHDVALDINQYKDKPFPILLAAPTGRAAKRMA
ETTGLPASTIHRLLGLTGREDGPEEPSKELDGGLLIIDEMSMVDTVLFQQLLTAIPSHMQ
VILVGDKDQLPSVGAGQVFHDLLQFSELPQIELTTIYRQGNDSSIIPLAHAIKDGHLPAD
FAVNQPDRSFIACNAYQVNHIVEQVVARAKAKGFSAEEVQILAPMYRGTAGIDQLNTTVQ
KIFNPLKSAHQKHLTYNGQDFRVGDKVLHLVNSPEDNVFNGDIGKIVGIDLANDSHNESK
KDQITIAFDQNEVTYQRNEWNRLTLAYSMSIHKSQGSQFKMVILPLVPQFARMLQRNLLY
TAVTRAEQMLILLGDSQSFERSVTNESVNRQTTLTKRLQQVFGGDTVSDETATIATTDQA
EAMPASEKATAVKKVASDEESATEKTQEPSSQSAGPTILTPALVSAGRIDPMIGMNGITP
ANFMPQVAN
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacgaacaagcacatttattttccgacgatattggtcgggaaccggtcacacac
tttatcgtcggtaaagtcgctgccgttttttttagcagtgccgatagtttttataaagtc
ttattagtcaaagtaactgaacagaacattgattggtcggaagatgagatcgttgttact
ggaaattttgcggatattcaggaggagacaacgtatcgttttaccggtaaaacggtcacg
catcccaaatacggggtccagtttcaagcggataattatcaaaatgaaacgcccacgaca
cgcgcaggcttgattgcctatctatctggtagtgattttcctgggttgggtaagcggact
gctgagcgaatcgtcgatactttgggcgaagatgccattgatcaaattttagctgatccg
aaggttttaaaaccaatcggacttcgggccagcgttcagacgactttgatcgacacgctc
acggtcaataacggtttggagcaaactatcattggacttaatgcgtacggttttgggagt
cggttagctgcggccatctatgcacgctatcaaggtgacactttggctaagattcaagag
aacccgtactgtttggttgaggatatcaaaggcgtcgggttcaaaaaagcggatcaaatt
gcggcccaacttaaaattgatccccaagcggatgaccggttaaaggcggccctattgact
gagattaatgagttgtgcgtggaaaacggtgatacgtataccacggctcaaccgttgctg
aatcaaacgttgcaactacttgagaatgctcgcaatgttcaaattgatccttcgaagctg
gctgatcagttggtcgtcttggcgaaggaaaataaaatcgtgggtgacgagaatcgtatc
tacttgcgcggcctctatgaagccgagtggcgcgttgcggaacatttacaacggttgtta
gccgccgataatgatgaaaaattgtctgaacgtgccgtggatcatgctatcgagcatgtc
ggtcgagctagcaacattacttatgatgaatcacaaaccgaagcactaaaagcggcgatt
acggcgcctgtttttctactaactgggggaccggggactggtaaaacgaccattatccgt
ggcttagtcgcgctctatgcggaattacacgacgttgcactagatatcaatcagtataag
gataagccttttccaatcctgctggcggcaccgactggacgggcagccaagcggatggct
gaaacgactgggctcccagctagtactattcatcggttgcttgggttgacggggcgtgaa
gatggtcccgaggagcctagtaaggaattagatgggggcctcctgattattgacgaaatg
tcgatggttgacacggtactgtttcagcagttactgacggcgattccaagtcacatgcaa
gtcattcttgttggcgataaggatcaactgccatcggtaggagccgggcaagtgtttcat
gatttattgcagtttagtgaactgccccaaattgagttaacgacaatctaccggcagggc
aatgattccagtattattccgttggcccacgccatcaaagatggtcatttaccggccgat
tttgccgtcaaccaaccggatcgctcatttattgcctgcaacgcttatcaagtcaatcac
attgttgaacaagttgtggcacgtgccaaggcgaagggcttcagtgctgaggaggtacaa
attctggccccgatgtatcgcggcactgccgggatcgatcagctgaataccacggttcag
aaaatctttaatccgttgaagagtgcccatcagaagcatctaacgtataacggtcaagat
tttcgggtcggtgataaggtcctgcacctcgttaattcacccgaggataatgtttttaat
ggcgacattggtaaaatcgtcggtatcgatctggcaaatgattctcacaatgaatcgaag
aaagaccagatcacgattgcctttgatcaaaatgaagtgacttatcaacgcaatgaatgg
aatcgattgacattagcgtacagtatgtcgatccacaagtctcaagggagccagtttaaa
atggtgattctgccactggtaccacaatttgcacggatgctacaacgcaatctactgtat
actgccgtgacacgtgctgaacaaatgctgatcctgttaggtgatagtcaatcatttgag
cggagcgttaccaatgaatcggttaatcgccaaaccacactgacgaaacggttacaacaa
gtctttggcggggataccgtatccgatgaaacggccactattgcgactactgaccaagca
gaggcaatgccagccagcgaaaaagcgacggcggttaagaaagttgcttctgacgaggag
tcggccactgaaaaaactcaggaaccgagttcccagtctgctggaccaacaattttgacc
ccagcgctagtcagcgctggccgaatcgatccgatgattggcatgaatggtatcacgcca
gctaatttcatgccgcaagtagctaattga
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