Limnochorda pilosa: LIP_2781
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Entry
LIP_2781 CDS
T04150
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
lpil
Limnochorda pilosa
Brite
KEGG Orthology (KO) [BR:
lpil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lpil03019
]
LIP_2781
03009 Ribosome biogenesis [BR:
lpil03009
]
LIP_2781
Messenger RNA biogenesis [BR:
lpil03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LIP_2781
Ribosome biogenesis [BR:
lpil03009
]
Prokaryotic type
rRNA processing factors
LIP_2781
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
TRAM
RNase_E_G_Thio
KH_1
zf_CopZ
KH_2
TcdA_TcdB
S1
DUF6381
Motif
Other DBs
NCBI-ProteinID:
BAS28610
UniProt:
A0A0K2SNC2
LinkDB
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Position
complement(2931320..2933020)
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AA seq
566 aa
AA seq
DB search
MRREIVVNAGHGETRAAVLEDRRLAELYIERDEDERVVGNIYKGRVENVLPGMQAAFVNI
GLERNAFLYVDDALAHYRNGMGGDDEPAERVKARSIKDVLHEGEEVIVQVTKEPIGTKGA
RVVTNLTLPGRYLVLMPTVEYVGVSRRIDDEEERTRLKALAKRLRPKGMGLIVRTIAGGK
DEEDLVRDGQFLLKVWDRVRRKAGEEKAPALLYKDYDLVYRLVRDAFTPEVTKFVVDSEE
EYQKTLELLETLSPNLKDRVYRYHEGPPIFESYQIEPEIEKALDRKVWLQSGGYIVIDQT
EALVSIDVNTGRFIGTTNLADTVLRTNLEAASEIARQLRLRNFGGIIVVDFIDMDSREHE
QMVLRRLEEELRKDKTKTHVLGFTHLGLVEITRKKTKQNVPDILQKPCPHCDGSGRVLSE
ATVAHRLERELRKLTHASPAGAFMVEAHPSVAALLIGPGGANLKRLEQDLNRSVYVRGME
HRHVEKPSVVAGSQEEIERQAMPVREGEVVSLKVEEPHISNPKDGIARVEGYVVDIEGAG
RRVGQQLQVEITRVFRTYAKARVVSG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgcggagagagatcgtggtcaacgccggccacggcgagacgcgggccgcggtcctggaa
gaccgccggcttgcagagctttacattgagcgcgacgaggacgaacgggtcgtaggcaac
atctacaagggtcgtgtggagaacgttctgcctgggatgcaggcagcgttcgtgaacatc
gggttggaacggaacgcgttcctctatgtcgacgacgcgctggcgcactaccggaacggg
atggggggagacgacgagcccgcggagcgggtcaaggcccgctccatcaaggacgtgctc
cacgagggcgaagaggtcatcgtccaggtcaccaaggagcccatcggcaccaagggggcc
cgggtggtcaccaacctgacccttcccggccgctacctggtgctcatgcccacggtggag
tacgtgggcgtctcgaggcgcatcgacgacgaggaggagcggacccggctcaaggcactg
gcgaagcgcctgcgccccaagggcatgggcctcatcgtccgcaccatcgccggcggcaag
gacgaggaggacttggtgcgagacggccagttcctcctgaaggtgtgggaccgggtgcgc
cggaaggcgggggaggagaaggcgcccgccctcctctacaaggactacgacctggtctac
cggctggtgcgcgacgccttcacgcccgaggtgaccaagttcgtcgtcgattcggaggag
gagtaccagaagactctggagctcctggagaccctctcgccgaacctgaaggaccgggtg
taccgctaccacgagggtccgcccatcttcgagtcgtaccagatcgagccggagatcgag
aaggcgctggaccggaaggtctggctccagagcggcggctacatcgtcatcgaccagacc
gaggccctggtgagcatcgacgtcaacacgggccgcttcatcggcacgaccaacctggcc
gatacggtgctgcggaccaacctggaggcggccagcgaaatcgcccgccagcttcgcctg
cgcaacttcggcggcatcatcgtggtcgacttcatcgacatggactcccgcgagcacgaa
cagatggtgctgcgccgcctggaggaagagctgcgcaaggacaagaccaagacccacgtg
ctcggcttcacgcacctggggctggtggagatcacgcggaagaagaccaagcagaacgtg
cccgacatcctccagaagccgtgcccgcactgcgacgggagcggccgcgtcctgtcggag
gccacggtggctcaccggctcgagcgggagctgcgcaagctgacccacgccagcccggcg
ggggcgttcatggtggaggcccacccgtccgtggcggcgctgctcatcgggcccgggggg
gcgaacctcaagcggctcgagcaggacttgaatcgttcggtctacgtccggggcatggag
caccgccacgtggagaagccgtcggtggtcgcgggcagccaggaagagatcgagcggcag
gccatgcccgtgcgggagggtgaggtcgtcagcctgaaggtggaggagccccatatctcg
aaccccaaggatggcatcgcacgggtcgaggggtacgtggtggacatcgaaggagcgggc
cgtcgggtgggccagcagctccaggtggagatcacgcgcgtcttccggacctacgcgaag
gcgcgggtcgtgtcaggatga
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