Lactiplantibacillus plantarum JDM1: JDM1_2917
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Entry
JDM1_2917 CDS
T00946
Name
(GenBank) ABC transporter, ATP-binding and permease protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lpj
Lactiplantibacillus plantarum JDM1
Pathway
lpj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lpj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JDM1_2917
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lpj02000
]
JDM1_2917
Transporters [BR:
lpj02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JDM1_2917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_21
RsgA_GTPase
AAA_16
AAA_30
AAA_5
AAA_23
AAA
MMR_HSR1
AAA_29
TsaE
AAA_28
T2SSE
AAA_18
AAA_7
Rad17
DEAD
DUF5906
SRP54
Zeta_toxin
FeoB_N
AAA_25
AAA_15
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
ACT63803
LinkDB
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Position
3158724..3160535
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AA seq
603 aa
AA seq
DB search
MRKEMSSVTKRNTYNEDEELTSRFNWHDYARLGHYLRPYSWRLCFVLITILIGNIAIILG
PYLMKIAIDTAIPNRNLPLIWALSGTFLISLVIAFLCFRYRIWAITEIGQSLLIDMRTDL
FTHLQELPFAYFDSRPHGKILIRVVNYINTLSDLLANGLVNLISDIISVLVTLIFMFAIN
WQLTLDSLALIPVLVLWAYLIQKKQRQAFRKLSDKQSNLNAYIHESIAGIKVTQGFAQEA
NAIQTFDAVADDNRRAYMQAVKIQYALGPGVQNISTITTALIYFIGIQQLGVVVSTGTLI
AFLGYINNFWNPVINIGNFYNSLITATAYLERIFETMDEKPQILDAPDAFNLPPIKGDVR
FNNVSFRYEEASPLTLHDISFHAQAGQTIALVGPTGAGKTTIINLLSRFYNVTTGNITID
NINLQQVTLDSLRQQMGVMQQETFIFSGTIMDNIRYGRLDATDDEVRSAAKIARADAFIQ
TLPAGYNTTVQEHGSSLSAGQRQLLAFARVLLADPRILILDEATAAIDTKTETLLQEGLN
ELLKGRTSFIVAHRLSTIQRADQILVINHGRIVEAGRHDQLMAMHGEYYRLYDSQYQMLQ
DQN
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaggagatgagtagtgtgaccaagcgaaacacctacaacgaagacgaagaactt
accagccgctttaattggcacgactacgcacgacttggccactatctacgaccttactcg
tggcgattgtgctttgtgttaatcactattttaattggcaacatcgccatcatcttgggt
ccctatttgatgaaaatcgcgatcgacactgcgattcctaaccgtaatcttccattgatc
tgggcattaagtggcacatttctaatcagcttagtcatcgcattcctgtgttttcgatat
cgtatctgggcaatcaccgagattggtcaaagtttactaattgatatgcggactgatcta
ttcacccatttacaagagttaccatttgcttattttgattctcgaccgcatggtaagatt
ctgatccgggtggttaactatatcaatacactaagtgatctactggcaaatggcttagtt
aacctcatatctgatattatctcagtcctcgtcacgttaatattcatgtttgcaattaac
tggcaattgacccttgatagtctcgcattgattccagtactagttttatgggcttacctg
attcaaaaaaagcagcgtcaagcctttcgcaaactaagcgataaacagtccaatctcaat
gcttatatccatgaaagcattgctggaatcaaagtgacgcaaggtttcgcccaggaggcc
aacgcgattcagacctttgatgcggttgctgatgacaatcggcgtgcctatatgcaagct
gtcaaaattcaatacgcgctcggtccaggggtgcaaaacatctcaacaattacaactgca
ctaatttactttatcggtattcagcaactgggggtcgttgtcagtactgggacgctaatt
gcctttttagggtacatcaataatttttggaacccagtgattaacatcggtaacttctat
aattccttaattactgccaccgcatacttggaacgtatcttcgaaactatggatgaaaag
ccacagattctcgatgccccggacgcctttaacctgccgcccattaagggagacgtccgc
ttcaacaatgtctcatttcgctatgaagaagccagcccgttgacattacacgacatctcg
tttcacgcccaagccggacaaacaatcgctttagttggaccaaccggcgctggcaaaacg
acgataattaatctattgtcgcgcttttacaacgtcacaactggcaatattaccatcgat
aatatcaatttgcagcaagttacacttgattcactgcggcaacagatgggtgtcatgcaa
caagaaacattcatcttttcgggcaccataatggataatattcgttacggtcgacttgac
gcaacggatgacgaagttcgttcggccgccaaaattgctcgcgcagatgctttcattcaa
acattgcccgctggctataatacaacggttcaggagcatggtagcagcttatcagcgggg
caacgacaattactcgcctttgcccgggttttgctagccgatccgcgaattcttatttta
gatgaagccactgccgcaattgacacaaaaactgaaaccttgttacaagaaggacttaat
gaattattaaaaggacgaactagttttatcgtcgcacaccgcttatccaccatccaacga
gcggatcagatacttgtgatcaatcatggccgcatcgtcgaggccggtcgtcatgatcaa
ctaatggcaatgcacggcgaatactatcgtctctatgactctcagtaccaaatgctccaa
gatcaaaattga
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