KEGG   Lactococcus piscium: LACPI_0806
Entry
LACPI_0806        CDS       T03909                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
lpk  Lactococcus piscium
Brite
KEGG Orthology (KO) [BR:lpk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lpk03032]
    LACPI_0806 (hup)
   03036 Chromosome and associated proteins [BR:lpk03036]
    LACPI_0806 (hup)
   03400 DNA repair and recombination proteins [BR:lpk03400]
    LACPI_0806 (hup)
DNA replication proteins [BR:lpk03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    LACPI_0806 (hup)
Chromosome and associated proteins [BR:lpk03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    LACPI_0806 (hup)
DNA repair and recombination proteins [BR:lpk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      LACPI_0806 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267 HU-CCDC81_euk_2 HU-CCDC81_bac_2 Ribosomal_L27_C Peptidase_C80 Glycos_trans_3N
Other DBs
NCBI-ProteinID: CEN28006
UniProt: A0A0D6DWX2
LinkDB
Position
I:835991..836266
AA seq 91 aa
MANKQELIAKVAESADLTKKDAEKAVNAVFESVSGFLAKGEKVQLIGFGTFETRERAARE
GRNPQTGAAIKIAATTVPAFKAGKALKDAVK
NT seq 276 nt   +upstreamnt  +downstreamnt
atggctaacaaacaagaattaatcgcaaaagttgcagaatctgcagatttaacaaagaaa
gacgctgaaaaagcagtaaacgctgtttttgaatcagtttctggattccttgcaaaaggt
gaaaaagttcaattaatcggttttggtactttcgaaactcgtgaacgtgcagctcgtgaa
ggtcgcaacccacaaactggtgctgctatcaagattgcagcaacaactgtacctgcattc
aaagctggtaaagctttgaaagacgcggttaaataa

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