Legionella pneumophila subsp. pneumophila Thunder Bay: LP6_2620
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Entry
LP6_2620 CDS
T02689
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
lpm
Legionella pneumophila subsp. pneumophila Thunder Bay
Pathway
lpm00550
Peptidoglycan biosynthesis
lpm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lpm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LP6_2620 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lpm01002
]
LP6_2620 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lpm01011
]
LP6_2620 (dacB)
Enzymes [BR:
lpm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LP6_2620 (dacB)
Peptidases and inhibitors [BR:
lpm01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LP6_2620 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
lpm01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LP6_2620 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
AGN15509
LinkDB
All DBs
Position
complement(2977373..2979139)
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AA seq
588 aa
AA seq
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MWAVWSLSSHAASMQFEVDKLINRLNPHVNLGIVVTDLTSGETLYKRNANRLYIPASNMK
LFSEAAALMALGPDYQFKNQLSTSANQLQQGVLHGNLYLHLSGDPSFSREDLKTLLSSLK
DWNITTIQGNVIIDSSLMSIPAYPPGWLTSDLSYSYGAPIAPLMVDSNRLTITVNPGAKA
GAPAIVEVDDGGGTINLNNQATTKASEKGCGVGFYLDPENNLTVRGCVGLGQWAVQQRIA
IKNPFVYAQGMIVSELAKSNIKLNGQVLLGRAPAGTLLIATRYSKPISQLMADTLKPSDN
LYADSLYLHAAAKIKGSPVDWKQAQPVIKNFLQQQTGIDLKDSNFTDGSGLSRYNLVTPA
QTMALLKFLYQRFPLSYEYIAALPISGRDGTLQKRFKTPNQQGFVRAKTGTMTGMNSLSG
YLYTANGHTLAFAMYINRLPGKPAGPGRPLLDALCTYFLQQSPTSSRLARVLSPHSRIKF
QFNPTQIELQRVHQAKWRRLETAVRQVLRGQDVNVVYRGNELIVTDNQSNANSVWKALQS
IGKKYSFAVALSSKVMPVTPSGKPLLLWVQAPLSENKAERTWIIREAV
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgtgggcagtatggtcactgtcatctcatgcggctagtatgcagttcgaggtggataaa
ttaattaatcggctaaaccctcatgtgaacctggggatagtagtgaccgatctaacctcg
ggcgagacgctatataaacgcaatgccaatcgtttgtatattcctgccagcaacatgaag
cttttttccgaggcagcggctctgatggctttgggtccagactaccaattcaagaatcaa
ctcagtacgagcgccaatcaattacaacaaggtgttttgcacggaaacttgtatttacat
ctcagcggcgatccttcgtttagcagagaagatttaaagacgttgctttcttcactcaag
gattggaatatcacaaccattcaaggtaatgtgatcattgacagtagcctgatgtccatt
cctgcctatcccccaggctggctaacttcggatttatcttatagttatggtgcgccaata
gcacctttgatggttgattccaaccgattaacaatcacggtcaaccccggggctaaagca
ggcgctcctgctattgttgaagtagatgatggcggcggtaccattaacctgaataatcaa
gcgaccacgaaggcgagtgagaaaggatgtggtgtagggttttatttggatcctgagaac
aatttaacggtaagaggctgtgttggattagggcaatgggctgttcagcaacgcatcgct
ataaagaatccttttgtttatgcccaggggatgattgtgagtgagcttgccaagtctaac
attaaattaaatgggcaggttttgcttggaagagctcctgctggtactttattaattgcc
actcgctattcaaagccaatttcccaactgatggcagatactttaaagccttctgataat
ttatatgctgatagtttatacttgcatgctgctgccaaaattaagggtagtcctgtggat
tggaagcaagcacagccagtaattaaaaactttttgcagcaacaaacaggaatcgattta
aaagactcgaattttacagatggttctggattatcacgttataatttggtaactccagcg
caaaccatggcgcttttaaagttcttgtatcaacgtttcccattatcatacgaatacatt
gctgctttacccatctctggtcgggatggtactttgcaaaaacggtttaaaaccccaaat
caacaaggatttgtgcgagccaaaaccgggacgatgacggggatgaacagtttatccggt
tacttgtatactgctaatggccatactttggcttttgctatgtatatcaatagattacca
ggaaaaccagctgggccaggacgtccattattagacgcattatgcacttatttcttgcag
caaagcccaacaagcagtcgactggcacgggtattatctccccacagtcgcattaagttc
caatttaatcctacacaaattgagttacagcgagttcatcaagccaaatggaggcgtttg
gaaacggcagtgaggcaggtcttgagaggacaggatgtgaatgtggtttaccggggcaat
gaattaatcgtgacagacaatcagtctaatgcgaatagcgtttggaaagctttacaatca
attggcaagaaatattcattcgccgtagctttgtcttctaaagtgatgcctgttacacca
tcgggaaaacctttgcttctttgggtgcaagcacctttatctgaaaataaggcagagaga
acctggataattcgggaagcggtataa
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