KEGG   Lactiplantibacillus plantarum 16: Lp16_0824
Entry
Lp16_0824         CDS       T02698                                 
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
lpz  Lactiplantibacillus plantarum 16
Pathway
lpz03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lpz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Lp16_0824
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lpz03021]
    Lp16_0824
   03400 DNA repair and recombination proteins [BR:lpz03400]
    Lp16_0824
Enzymes [BR:lpz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Lp16_0824
Transcription machinery [BR:lpz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Lp16_0824
DNA repair and recombination proteins [BR:lpz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Lp16_0824
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: AGO07518
UniProt: A0A806IZC6
LinkDB
Position
896972..900613
AA seq 1213 aa
MIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVIESGNTPLEKKQLLSEREYREKKAQYGNEFEAAMGAEAIKRLLN
NVDLEKEARDLKETLKDASGQKRTRAVRRLDIIEAFVTSGNEPAWMVMDAIPVIPPDLRP
MVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGR
RGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPFLKMNQMGLPRQ
MALELFKPFIMKELVKRELASNIKNAKRKIEHADDDVWGVLEDVIKEHPVLLNRAPTLHR
LGIQAFEPVLVSGKAMRLHPLACEAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAHHIL
APKDGKPVVTPSQDMVIGNYYLTTEEIGREGEGMIFKDLNEAQKAYQSGYVHLHSRVGIQ
VSSMPDKPFTDDQKQAVLVTTVGKAIFNNILPGKFPYLNEPTNDNLIAGTPDKYFLKPGE
DIHQFLDAQEIIPPFKKGFLADIIAEVYKQYHVTATSLLLDRMKDLGYNISTKSGLTVGV
ADITGLKEKPAIIAEAHKQVNTISKQFRRGLITDDERYERVIGVWNDAKDQIQQKLIESF
NADNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGKIMELPILSNFREGLSVLEMFIST
HGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREKDCGTDRGLRIHAIMEGNEVIEPLY
DRILGRYTMKTVFDPETHDEIVGNNVLIDEDLAHKIVDAGVTEVTIRSAFTCNTKHGVCE
HCYGRNMATGDEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGDDITQGLPRVQEIV
ESRNPKGRAEISEVTGTVELIEENPAERTKEVTVKGETDTRTYTLPLTARMAVSEGDFIH
RGAALNIGSIDPKQLIQVRDVLSTENYLLREVQKVYRMQGVEIGDKHVEIMIRQMLRKVR
VMDPGDTDVLPGTLMDIADFKDENYKTLIAGGIPATSRPVILGITKAALETNSFLSAASF
QETTRVLTDAAIRGKNDPLIGLKENVIIGKIIPAGTGMPVYRHIKPKEVGNVADGVYSIS
DLEKQMQEQDASK
NT seq 3642 nt   +upstreamnt  +downstreamnt
ttgatcgatgtcaacaagtttgaaagcatgcaaatcggtctggcatccccagacaagatt
cgcagctggtcatatggcgaagtcaaaaagccagaaaccattaactaccggacattgaaa
cctgaaaaagacggtctgtttgacgaacggatttttggtcctactaaggattgggaatgt
gcttgtggtaaatacaaacggattcgttataagggtattgtctgtgaccgttgtggggtc
gaagtgactcgtagtaaagtccgtcgtgaacggatgggtcatatcgaacttgccgcacca
gttactcacatctggtactttaagggaattcctagccggatgggcttagtcttagacatg
agtccccgggcacttgaagaaatcatttacttcgcttcatacgtcgttatcgaatctggt
aatacgccacttgaaaagaagcaattactttctgaacgtgaataccgtgagaagaaggct
caatatggtaacgaatttgaagctgccatgggtgccgaagccatcaaacggttattgaat
aacgtggatcttgaaaaagaggcacgtgatttaaaggaaactctgaaggatgcttctggt
cagaagcggacccgggccgttcggcggcttgatatcatcgaagctttcgtgacatctggt
aacgaaccagcttggatggtaatggacgcaattccggttattcccccggacttacggcca
atggttcaattggaaggtggtcgttttgccacctctgacttgaacgacttgtaccggcgg
gttatcaaccgtaataaccggttgaaacgcttgttggacttaaatgcacctgggattatc
gtgcaaaacgaaaagcggatgttgcaagaagccgttgatgcgttgatcgataatggtcgt
cgtggccgtcccgttgctggtcctggtaaccggccattgaagtctctttcacacatgttg
aaagggaagcaagggcggttccgtcaaaacttacttggtaagcgggttgactattctggt
cgttcggttatcgatgttgggcctttcttgaagatgaaccaaatgggcttaccacgtcaa
atggcgttggaattgttcaaaccgtttatcatgaaggaattggttaaacgtgaattagct
tctaacatcaagaatgctaagcgaaagatcgaacatgctgatgacgatgtctggggtgtg
ttggaagacgttatcaaggaacatcctgttctcttgaaccgcgcccctacgcttcaccgt
ttagggattcaagctttcgaacccgtcttggttagtggtaaagcgatgcggctccatcca
ttggcttgtgaagcttacaacgccgatttcgatggggaccaaatggctattcacgtccca
ctttcagatgaagcccaagctgaagcacggctcttaatgttggctgcccaccatattttg
gcgcctaaggacgggaaacccgttgttacgccatctcaagatatggttatcggtaactac
tacttgacgactgaagaaatcggtcgtgaaggcgaaggtatgatcttcaaggacttgaat
gaagcgcaaaaggcttaccaatcaggttatgtacatttgcatagccgggtcggcattcag
gtctcatcaatgcctgacaagccattcacggacgatcagaagcaagcagtcttagtcacg
acggttggtaaggcaatcttcaacaacattttgcctggcaagttcccttacttgaacgaa
ccaactaacgataacttgattgctggtacaccggacaagtatttcttgaagcctggtgaa
gatattcatcaattcttggatgcccaggaaatcattccaccattcaagaagggcttcttg
gccgacattatcgctgaagtttacaagcaatatcacgtgacagcaacgtcactcttgctt
gaccggatgaaggacttaggttacaacatttcaactaagtctggtttgacggttggggtt
gccgatattactggtttgaaagaaaaaccagcaattatcgccgaagcccataaacaagtt
aatacgatttcaaaacagttccgtcgtggtttaattactgatgacgaacgttatgaacgg
gtcattggtgtctggaacgacgctaaggaccaaatccaacaaaaactgattgaaagtttc
aacgcggataacccaatctttatgatgagtgattctggtgcgcgtggtaacatttcaaac
tttactcagttagctgggatgcgtggtttgatggctgcccctaacggtaagatcatggaa
ttaccaatcctttcaaacttccgtgaaggtttgtctgtcttggaaatgttcatttcaacc
cacggtgctcgtaaagggatgaccgatacggcgcttaagactgccaactcaggttacttg
actcggcgtctggttgatgtggctcaagatgttatcgttcgtgaaaaggattgtgggact
gaccgtgggttgcggattcacgcaatcatggaaggtaacgaagtcatcgaaccgttgtat
gaccggatcttaggtcgttacacgatgaagactgtctttgatcctgaaacgcatgatgaa
attgtcggtaacaacgtcttgatcgacgaagacttagctcataaaatcgttgatgctggt
gtaacggaagttacgatccgttctgcatttacttgcaacactaagcatggggtttgtgaa
cattgctacggccgtaacatggctactggtgatgaagttgaagttggtgaagctgttggg
acagttgccgcacagtctatcggtgaacccggtactcagctgaccatgcggaacttccat
accggtggtgttgccggggacgatattacccaagggttgcctcgtgtgcaagaaattgtg
gaatcacggaatcctaaagggcgtgccgaaatctcagaagttactgggacggttgaatta
attgaagaaaatccagcggaacggacgaaggaagttacggttaagggtgaaactgatacc
cggacttacacgttgccgttaacagcacggatggcggttagtgaaggcgactttattcac
cgtggtgctgcgttgaacattgggtcgatcgatcctaagcaattgattcaagtacgtgat
gtcttatcaactgaaaactacttgctccgtgaagttcaaaaggtttatcggatgcaaggg
gttgaaattggcgataagcacgttgaaatcatgattcggcaaatgttacggaaggttcgg
gtcatggatccgggcgataccgacgtcttgcctgggacgttaatggatattgcagacttc
aaggacgagaactacaagaccttgattgctggtggtattcctgcaacgtcacggccagtc
attcttgggattactaaagccgctcttgaaacgaatagtttcttgtcagctgcttcattc
caggaaacgacacgggtcttaactgatgctgctattcgtggtaagaacgatccactgatc
gggcttaaggaaaatgttatcattggtaagatcattcctgctgggactggtatgccggtt
taccgtcatatcaaaccaaaggaagttggcaacgtggctgatggggtttactcaatcagc
gaccttgaaaaacaaatgcaagaacaagatgctagcaagtaa

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