Lactiplantibacillus plantarum 16: Lp16_2119
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Entry
Lp16_2119 CDS
T02698
Name
(GenBank) ATP-dependent nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lpz
Lactiplantibacillus plantarum 16
Brite
KEGG Orthology (KO) [BR:
lpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lpz03400
]
Lp16_2119
Enzymes [BR:
lpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Lp16_2119
DNA repair and recombination proteins [BR:
lpz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Lp16_2119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_16
AAA_30
AAA_12
ResIII
Peptidase_C4
Motif
Other DBs
NCBI-ProteinID:
AGO08793
LinkDB
All DBs
Position
complement(2245852..2249601)
Genome browser
AA seq
1249 aa
AA seq
DB search
MSEGTNYTPSQQAVIAQQGNNLLVSASAGSGKTTVLIERIMRKILAGTNIDQLLVVTFTN
LAAKHMKQKLESQINKRISQLMTDNPAQTTASPAIRQLRQQLNLLGVANISTLDAFCLRV
IQRYYYVIDLDPVFRLLTDNTEGLLIRDQVWDSVREQLYDEDGTLFDLLTANFSNDRSDD
GLSRLIFRLFDFAQSTPDPEGWLSKLPEPYQVDEEALTASAFYQQQLLPLLINEVDGMQM
KLRQAQKVATDADLVPKTLEVLATAQKTLTTLREQLATASWNELRTQVATFKIGALKKTY
KDEPEKTARAKTMGTFVDGVKKQMTTLSETYFAADEQQVLDIMVGAKSIVTELVDATKQF
KTAFAAEKRRRHVLDFSDLEHLTLQILTSDNESGQAALAQLRAQFEEVMVDEYQDINSLQ
ESILQLLARDQPGNMFMVGDVKQSIYQFRLADPLLFLHKYHDFGTNPEHGERIVLAENFR
SVANVDHLTNLIFSQLMDAPVGQIDYDEAAYLKYGPKDYPADMPQTTNLLLYQTETDKST
EDVSTDETNFSIDDPAVGSITMVAQKILALKAQDKPIYERANGEYRPFRYSDVALLVPTR
NHNLTIIDVFKRYHIPVVVNDAQNYFQTTEIRIMMALLSIIDNPYQDIPLVAVLRSPIVG
LDENQLVYLRIQNKTSDYFQAVQDFYHHYPTGPATEYGDQVYAKIETFLTQLTEFRDLAR
RNQIVTLIWQIYERTGFLDYVGGMPAGKQRQANLHALYERAYTYEQGSFKGLFQFVRFIR
RMQEKDQDLAAAVAETDAEAVNVMTIHGSKGLEYPVIFVMDMDKQFNQTDTRSSALLDRE
AGIGITYLDPETRVKYPTLPQVVTKQVVSKKMRAEEMRKLYVAMTRAQQQLYLVGTIKDI
DTATEKWRQAFASDGRVLSAQARIAATNQLDWVGMAVIRHPAMKAYWGDEWPNYELTDDP
TKLAVELGDATTVLAEQSEAVSGTQPDALELVEQQVTIDVDQVTRDYLTTLLNFHYPHQA
STTTTAYQSVSEVKRIFEDPDTPLMNANPTVSQRRSRPTSRFVTGSLELPQFLQTMQAPT
SAEVGSATHLVLEQLDLTKPVNETTVQSTIDGLVANRVLTTNVAKLIAVDTIVAFYQSAL
GSQILDNPAKVHREVPFSLLIPARQIFDVDEHETGKVLIHGIIDGYLETADGLTLFDYKT
DHVKRPEELKTRYAGQVKLYAAALASMYPGKVTKQYLYSLPQQVFVPVN
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagggtacaaactatacacctagccagcaagctgttatcgcacagcagggaaat
aacttgttagtttcagcttcggctggttctggaaagacgaccgtattgatcgaacgtatt
atgcgcaagatattggccggcacgaatattgaccagttactcgtggtgacgtttacaaac
ttagctgccaagcatatgaaacaaaagctggaatcgcaaatcaataagcgaatctcacag
ttaatgacggacaatccggcgcaaaccacggcgtcaccagcgattcggcaattacggcag
caattaaatttgctcggggtagccaacattagtacgttggatgctttttgtctccgcgtg
attcagcgttattactacgttattgatttggatcctgtttttcgcctattgacggacaac
actgaggggttactcattcgtgatcaggtttgggacagtgttcgtgaacaattatatgat
gaagatggtacgttatttgacttattaacagcgaatttttctaatgatcgaagtgatgat
ggtctcagtcgattgatttttcggttatttgattttgcccagtcgaccccggatccggaa
ggctggctgagcaagttaccagaaccttatcaggtggatgaggaagcgttaacggccagt
gccttttatcaacaacaattattaccattgctcattaatgaagtcgatgggatgcaaatg
aaattacgacaggcgcaaaaagttgcgacggatgctgacttagtcccgaaaacgcttgag
gtactcgctacagcacaaaaaacgctgacgacgctccgtgaacaattggcaacggcaagt
tggaatgagttacgtactcaagtcgccactttcaagattggagctctcaaaaaaacttat
aaggacgagccggagaagactgcacgggccaaaactatgggcacatttgtggacggtgtc
aagaaacaaatgaccacccttagcgagacttattttgcggccgatgagcagcaagtctta
gatattatggtaggggcaaagtcaattgtgactgagctagtggatgcgaccaagcagttt
aagacggcttttgcagctgaaaaacggcggcgacacgtcctggacttttcggatttggaa
cacctaacgttgcaaatcttaacgagtgacaatgaaagtggtcaggcagctttggcgcag
ttacgggcccaatttgaagaagttatggttgatgaatatcaagatattaactctttgcaa
gaaagtattttgcagctgttggcgcgcgaccagccaggaaatatgttcatggtgggagac
gtcaaacagtcgatttaccagttccgattagctgatccgttattgtttttgcacaagtat
cacgattttgggacgaatcccgaacacggggaacgaatcgtattagctgaaaacttccgg
tcggtggcgaatgtcgatcatttgactaacctaatctttagtcagctgatggacgcgccg
gtcgggcaaattgattatgatgaagcggcttacctcaagtatgggcccaaggattatccg
gccgatatgccacaaacgacgaatctattactttaccagacggaaactgacaagtcgaca
gaagatgtctccacggatgaaaccaatttttcaattgatgatcctgccgttgggagtatc
acgatggtcgcccaaaagattttggcacttaaggcccaagataagccaatctatgaacgt
gctaatggggaataccggccgtttcgttacagcgacgtggcgttactagtaccaacacgt
aatcataatttaacaattattgatgttttcaaacggtatcacattcccgttgtggtcaat
gatgcccagaattattttcaaaccactgagattcgaatcatgatggcactactcagtatt
atcgataatccatatcaagatattccgttagtggcggttctacgctcgccaattgtcgga
ttagacgaaaatcaattagtttatttgcgtatccagaataaaacgagtgattattttcaa
gccgtccaggacttttatcatcattatccgactggtccggcgactgaatatggtgatcaa
gtttatgctaagatcgagaccttcttgacacaattgactgaatttcgagatctggcacga
cgtaatcaaatcgtaaccctgatttggcaaatctatgaacgaactggctttttagactac
gttggcggcatgccggctggtaaacagcgtcaggctaatctccacgctttatatgaacgt
gcttatacgtatgaacagggcagttttaagggcttatttcagttcgttcgttttattcgc
cggatgcaggaaaaggatcaggacttggcagctgccgtggccgagactgatgcggaagcg
gtcaacgtaatgacgattcatggtagcaaggggcttgaataccccgtgatttttgtgatg
gatatggataagcagttcaatcagactgatacgcgctcaagcgcgctattggaccgagaa
gcggggattgggattacttatttggacccagaaacgcgtgtgaagtacccgaccttgcca
caagttgtgactaagcaggtagtcagcaagaagatgcgcgctgaagagatgcggaaacta
tatgtcgcgatgacgcgagctcagcaacagctctatttggttggaacaatcaaggatatt
gataccgcgaccgaaaaatggcggcaggcctttgctagcgacgggcgcgtcttaagtgcc
caagcacggattgcggcgactaatcaattagattgggtcggtatggccgtgatacggcat
ccggccatgaaggcatattggggagatgaatggcccaattacgaattgacggatgatccg
accaagctagccgttgaattgggagatgccaccaccgtcctggcggagcaaagtgaagcg
gtatcgggtactcaacctgatgcgcttgaactagttgaacagcaagtcaccatcgatgtt
gatcaagtaacgcgtgattatctgaccacgttactgaattttcattatccacaccaggct
tccacgacgacgacggcatatcaatcggtatcagaagtgaaacgaatctttgaagatccg
gatactccgctgatgaatgcgaacccgactgttagtcagcggcgttcacgaccgacatcc
cggtttgtgacagggtcactggagttaccacaatttttacaaactatgcaggcgccaacc
agtgcggaagttgggagtgcgacccacttagttttagaacaacttgatttgaccaaaccg
gtcaatgaaacgacggttcaaagtacgattgatgggttagtggctaaccgggtcttaacg
accaatgtcgcgaaattgattgcagttgacaccatcgtggctttttaccagagtgcgctg
ggcagtcaaattttggataatccggcgaaggtgcaccgcgaagtgccattctcgttactg
attccagcacgtcagattttcgatgttgatgaacatgagacgggaaaagtcctgattcat
ggaattattgacggctatttagaaacggctgatgggttaaccttgtttgattataagacg
gaccacgtcaagcggcctgaagaattgaagacgcgctacgctggtcaagttaaactatat
gcagcagcgctagcgtcgatgtatccaggaaaggtgactaaacagtatttgtactcactg
ccacaacaggtgtttgtgccagttaattaa
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