Fructilactobacillus sanfranciscensis: LSA_04990
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Entry
LSA_04990 CDS
T01627
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lsn
Fructilactobacillus sanfranciscensis
Pathway
lsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LSA_04990 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lsn03019
]
LSA_04990 (groL)
03110 Chaperones and folding catalysts [BR:
lsn03110
]
LSA_04990 (groL)
03029 Mitochondrial biogenesis [BR:
lsn03029
]
LSA_04990 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lsn04147
]
LSA_04990 (groL)
Enzymes [BR:
lsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LSA_04990 (groL)
Messenger RNA biogenesis [BR:
lsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LSA_04990 (groL)
Chaperones and folding catalysts [BR:
lsn03110
]
Heat shock proteins
HSP60 / Chaperonin
LSA_04990 (groL)
Mitochondrial biogenesis [BR:
lsn03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LSA_04990 (groL)
Exosome [BR:
lsn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LSA_04990 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LSA_04990 (groL)
Exosomal proteins of breast cancer cells
LSA_04990 (groL)
Exosomal proteins of colorectal cancer cells
LSA_04990 (groL)
Exosomal proteins of bladder cancer cells
LSA_04990 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KfrA_N
Motif
Other DBs
NCBI-ProteinID:
AEN98943
UniProt:
G2KVC8
LinkDB
All DBs
Position
485966..487585
Genome browser
AA seq
539 aa
AA seq
DB search
MAKEIKFSDDARSEMLKGVDKLADTVKTTMGPKGRNVVLEETAGNPTITNDGVTIARAIS
LPDHFQNMGAKLVAEVASKTNDVAGDGTTTATVLTQAIVKEGMKNVTAGANPVGVRRGIE
KATAAAVAGLHKMSHKVENKEDIAQIASISSASEKVGKLIADAMEKVGNDGVITIEDSKG
VETSLDVVEGMEFDRGYMSQYMVTDQEKMEADLDNPYILVTDKKINNMQDIMSLLQEVVQ
QGRSLLIIADDIGGEVLPTLVLNKMRGTFNVVAVKAPGFGDRRKAQLQDIAVLTGATVIT
DDLGLELKDTTLEQLGQANKVNVTKDKTTIVEGKGSKEAIAKRVNEIKTQLAATTSQFDR
EKLQERLAKLAGGVAVIKVGAATETELKERKYRIEDALNATRAAVEEGFVPGGGTAFINI
LKDVDAVEATGDEKTGVEIVSRALEAPVKQIAANAGVDGAVVVDHLKQEKPGIGYNAADD
KYEDMIAAGVVDPTKVSRSALQNAASVSSLLLTTEAVVAEKPEENNAAPAMPQGMPGMM
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagagattaaattttctgatgacgcccgtagcgaaatgcttaaaggggtcgac
aaattagcagatacagttaaaactacaatgggtcctaagggacggaatgtcgttttggaa
gaaacagctggtaacccaaccattactaatgatggggttacgattgctcgtgcaatttca
ttgccagatcatttccaaaacatgggtgctaaactagtcgctgaagttgcatcaaaaact
aatgatgttgctggtgatggtacgacaactgctacggttttaacgcaagcaattgttaaa
gaaggcatgaagaacgtcactgctggtgctaacccagttggtgttcgtcgtggaatcgaa
aaagcaactgcagctgccgttgctgggcttcacaagatgagtcacaaagtggaaaacaaa
gaagatattgctcaaatcgcatcaatttcatctgccagcgaaaaagttggtaaattaatt
gcagatgccatggaaaaagttggtaacgacggagtcattaccattgaagactctaaaggg
gttgaaactagccttgatgtcgttgaaggaatggaatttgaccgtggttacatgtcacaa
tacatggtaactgaccaagaaaagatggaagcagatcttgataatccatacattttggta
accgataaaaagattaacaacatgcaagatatcatgtcacttcttcaagaagttgtgcaa
caaggtcgttcattgttaatcattgccgatgatattggtggtgaagttcttccaaccctt
gtattaaacaagatgagaggaaccttcaatgtagttgctgttaaagcacctggttttggt
gaccgtcgtaaagctcaattacaagatattgcagttttgactggagcaactgtcattact
gatgacttaggtcttgaattaaaggacactacccttgaacaattaggtcaagctaacaaa
gttaacgttactaaagacaagactacgattgttgaaggtaagggaagcaaagaagccatt
gctaaacgagttaacgaaattaaaactcaattagctgctacaacttcacaatttgatcgg
gaaaaacttcaagaacgccttgctaaattagccggtggtgttgctgttatcaaagttggt
gctgctactgaaactgaattaaaagaacgcaagtaccgcattgaggatgctttgaacgca
actcgtgctgccgttgaagaaggctttgttcccggtggtggtactgcattcatcaacatt
cttaaagacgttgatgcagttgaagctactggtgatgaaaagactggagttgaaattgtc
agtcgggccttagaagcaccagtaaaacaaattgctgctaatgcgggagttgatggtgcc
gtggtcgttgatcacttgaaacaagaaaaaccaggaattggttacaatgctgcggatgac
aaatacgaagatatgattgctgccggagttgttgatccaaccaaggttagtcgctcagca
cttcaaaatgctgcatctgtttcatcattgttattaacgactgaagcagtcgttgctgaa
aaaccagaagaaaacaatgctgcacctgctatgccacaaggaatgcctggaatgatgtaa
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