Candidatus Liberibacter solanacearum: CKC_01135
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Entry
CKC_01135 CDS
T01373
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
lso
Candidatus Liberibacter solanacearum
Pathway
lso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKC_01135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_01135
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CKC_01135
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CKC_01135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
RecR_C
Toprim
NapD
DcuC
RecR_ZnF
Motif
Other DBs
NCBI-ProteinID:
ADR51978
UniProt:
E4UC88
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All DBs
Position
complement(220170..220775)
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AA seq
201 aa
AA seq
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MKKKITGIEIENLIKMLARIPGFGPRSARRATLHLVKKKEQLLGPLADTMADIYKKVCLC
SICGNIDTIDPCIICIDEQRDSSVIVVIEDVADLWALERAGAVNALYHVLGGTLSPLDSI
GPEDIGIQSLIERIKVKKIRELILAISATIEGQTTAHYIMDKLKNMNIKITRLAYGIPIG
SELDYLDEGTLFEAIRSRTVL
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaaaaataacagggatagaaattgaaaatcttattaaaatgttagcgcgtatt
ccaggatttggacctcgttctgctaggagggcgactttgcatttggttaagaaaaaggaa
caattgttaggtccattagcggacactatggcggatatatataaaaaagtttgtttgtgt
tctatttgtggaaatattgatactatagatccttgtattatttgcatagatgagcagcgt
gatagttctgtaattgtggtaatagaagatgtagctgatttatgggctttagagcgtgct
ggagcggtaaatgcgctttatcatgttcttggtggaaccctttcccctctggatagcatt
ggtccagaggatataggaatacaatctttgatagagagaatcaaagttaaaaaaattcgc
gaactaattcttgctattagtgctacgattgaggggcagactacagctcattacattatg
gataaacttaaaaatatgaatattaaaatcactcggttggcatatggtatccctataggc
agtgagttagactatcttgatgaagggacgctttttgaggcgattcgttctcgcaccgtt
ttataa
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