Candidatus Liberibacter solanacearum: CKC_03050
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Entry
CKC_03050 CDS
T01373
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
lso
Candidatus Liberibacter solanacearum
Pathway
lso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CKC_03050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lso03400
]
CKC_03050
Enzymes [BR:
lso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CKC_03050
DNA repair and recombination proteins [BR:
lso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CKC_03050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecG_wedge
RecG_dom3_C
tRNA_anti-codon
SNF2-rel_dom
AAA_30
SLFN-g3_helicase
AAA_22
SecA_DEAD
tRNA_anti_2
DAP3
NucS_N
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
ADR52359
UniProt:
E4UDB9
LinkDB
All DBs
Position
complement(652708..654810)
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AA seq
700 aa
AA seq
DB search
MRPSLLNPLFAPLSSLRGVGEKNVLLFSKIIDFGNANESRFIDLLFYYPSSFIDRRYHPK
ISEISEERVVTITGHIASLPSVRSPKKIPYQILLNDGTGEISLLFFHKKTEWLKNIFFKG
RKITVTGQIKKFKNRLTMIHPHYFFYDSQDVILPLIEPIYSLPTGLSADFFKKIVDEALS
RLPTLPEWLENDLLQEKSFPSMKEAFKIIHNPRDVKDFEWTSPARERLAYDEFLAGQIAL
LLVRKKFKEELGIPIQVEGKIAQKIVQSLPFSPTKSQNLAIRDILQDMSQKNRMLRILQG
DVGSGKTLVALIAMATAVEAGGQAVIMAPIGILAQQHYEFIKKYTQDSQIGIEIITGNMP
KSQRKIALKRIANGQAQIIIGTHALFQDSIQYHKLILIVVDEQHRFGVQQRLKLTQKGNS
PHVLLMTATPIPRTLILTAFGDINVSKITEKPAGRKPIKTVIIPISRINEVVERLKVVVS
ENKKAYWICPQIEEKEESHFCSVIERFKSLQEQFGSDIAIIHGRMSDTDKESIMNSFKNG
TYKLLIATTVIEVGVDVIDASIIIIEHAEHFGLAQLHQLRGRVGRGEEVSSCILLYHPPL
SRVSYTRLSILRNTEDGFLIAEEDLKQRGEGEILGIKQSGMPKFLIAQPELHSTLLEIAR
KDAINIIKQDPNLTSVRGRSLRILLYLYRYNEAFQFIKAG
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccttccttactcaatcctctttttgcccctttatcgtctcttcgtggcgtcggg
gaaaaaaatgttttgcttttttccaaaattatagattttggaaatgcgaatgaatcccgt
ttcatagaccttttattttattatccttcatcctttattgatcgtagataccatccaaaa
atttcagaaatttcagaagaaagagttgtaacgataactggtcatatcgcctctctcccc
tctgtaagatcccctaaaaaaataccttatcaaattctactaaatgatggaactggtgaa
ataagcttattattttttcacaaaaaaaccgagtggttgaaaaatattttttttaaagga
aggaaaattacggttacaggacaaataaaaaaattcaaaaaccgcctcaccatgattcat
cctcattattttttttacgattctcaagatgtaatattacctcttattgaaccaatttat
tctcttcccacgggcttatcagccgatttttttaaaaaaattgtagacgaagcactatca
cgattaccaacattacctgagtggttagaaaacgatttattacaagaaaaatcctttcct
tccatgaaagaagcattcaaaattattcacaatcctcgtgatgtaaaagattttgaatgg
acatctcctgcaagagaaagattagcttatgatgaatttttagctggacaaattgcgttg
ttactggttcgaaagaaattcaaagaagaattaggaattccaatccaagttgaaggaaaa
atagctcaaaaaattgtacaaagccttcctttttctccaacaaaaagtcaaaacctcgcc
atcagagatattctccaagatatgtcgcaaaaaaatagaatgcttcgtattctacaagga
gacgtagggtctggaaaaacactcgttgctttaattgccatggcaacagcagtagaagcg
ggaggacaagctgttatcatggctcctatcggtattttagcgcaacaacactatgaattc
atcaaaaaatacacgcaagattctcaaattggtatcgaaattattacagggaatatgccc
aaatcacaaagaaaaatagccttaaaacgtattgccaatggtcaagcacaaattatcatt
ggcactcacgccctttttcaagattccattcaatatcataaactcattttaattgttgta
gatgaacaacatcgttttggagttcaacaacgtcttaaattgactcaaaaaggcaattct
cctcatgtcttattgatgacagcaactcctattcctcgcacacttattctcaccgctttt
ggtgacattaatgtttccaaaataacggaaaaacctgcaggcagaaaacctattaaaacc
gttattattcctattagtagaataaatgaagttgttgaaagactgaaagtagttgtgtcc
gaaaataaaaaagcctattggatttgtcctcaaatcgaagaaaaagaagaatcgcatttt
tgttcagtgatagaacgctttaaaagcctgcaagaacagtttggatcagatatcgctatc
attcacggacgcatgtctgatactgacaaggaatcaatcatgaattcttttaaaaatgga
acatataaattgttaattgcaacaaccgttattgaagtcggagtagatgttattgatgct
tctattataataatagaacatgcagaacattttggacttgcgcaactccatcaattaaga
ggaagggttgggcgtggcgaagaagtatcaagttgtattttactataccaccctcctcta
agtagagttagttatacaagattatctatactcagaaatacagaagatgggtttcttatt
gctgaagaagatttaaagcaacgtggagaaggagaaattcttggcataaagcaatctgga
atgccaaaatttctcattgctcaacctgaattacatagtacactattagaaatagcacgc
aaagatgccatcaatattatcaaacaagatccaaatctgaccagtgttcgaggacgatct
ctacgcatacttttatacctctatcgatataatgaagcatttcaatttattaaagcagga
taa
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