Lactuca sativa (garden lettuce): 111909977
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Entry
111909977 CDS
T05352
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
lsv
Lactuca sativa (garden lettuce)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
Lactamase_B_2
RMMBL
Anticodon_2
Motif
Other DBs
NCBI-GeneID:
111909977
NCBI-ProteinID:
XP_023761536
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Position
4:complement(335438334..335444723)
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AA seq
1346 aa
AA seq
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MASPSSSKPKTLTLDSTALFLQSPQTTCPPLSFSLLSSRSPLPPMPTDFPLSKLIPKTKF
IVDGFRLSGDYSVSYFLSHFHSDHYGGLNANWSKGIIFCSEITARLVIQVLQVSASLVVP
LPLSESVFIDGCEISLVDANHCPGAVQFLFKIPTGDGSCERYVHTGDFRYSVSMKSETVL
NEFTGADAVFLDTTYCNPKYVFPSQQESIDYVVSVINKYSLENDGGLKSVLFLVATYVIG
KEKILLEISRRCKRKIHVDDRKLGILHTLGFGEDEVFTTKESESDVHVIGWNVLGETWPY
FRPNFAKMNEIKDAKGYSKVVGFVPTGWTYEVKHNKFAVRTKDPFEIHLVPYSEHSNYEE
LREYVKFLRPKRVIPTVGVDVENLDGKHVNKMLKHFAGLVDDMAIKQDFLKGFHRGSKGQ
NENLEKDPQKEKEAKNDSFSLCDQKDEHETDEMLQELLDCLPDWVTRAQMMDVLSKSRKN
VVESVSYFYEHETEYYEQIITSVSTSASQENPVEILKEVIAHASSTSSKGFTSPSPPVKS
LLKTDDVSSSKRMTSSTIKQTKSINSPNKKKQSSSSKNTISPNQKRKKINDNISSKKPKI
TSQDGSNGPKQCTITKFFNKLSPVVEISNNDVIKTYKDEVDQFIQIINGNESLHDYATTL
LEETKGDINKALDLYYLKDKQSENQKRIFSNEDTEASQDLISLPPEKYSPIDHACWKDGE
FAPYLHLARTFNLVEGEKGKIKATSMLCNMFRSLLILSPEDVLPAVYLCTNKIAPDHENT
ELNIGGSIVTSAMEEACGTNRLKIRELYNTLGDLGDVAQLCRQTQRLLAPPAPLSIRRVY
SVLREISVQTGNGSTLRKRNLIINLMRSCREMEIKFIVRTLVKNLRIGAMMRTVLPSLAQ
AILLNSSHETTKETLQGLSAAVVEAYNMLPNLDLLIPSLMEKGIQFSSSTLSMLPGIPIK
PMLAKITNGIPQVLKLFQGKAFTCEFKYDGQRAQIHKLPDGSIRVFSRNGDETTSRFPDL
INIINDTCNKDTMSFIIDAEVVAVDRKNGGKLLSFQELSSRDRGSKNSSILVDNIKVDIC
VFVFDVMFANGKQLLGFPLRERRKYMKGLFGDEKSGYFEYSQEITVEMDDADVANEATVS
KMNRFFDEAFHSSCEGLMFKSLDVDAGYLPSKRSDSWLKVKRDYVEGLNDSLDLVPIGAW
YGNGRKAGWYSPFLMACYDPDTEEYQSVCRVMSGFSDAFYKEMKEFFVDEKMMSKNEKPV
YYQTGEEPDMWFSPEVVWEIRGADFTVSPVHHAAMGLVHPSRGISVRFPRFIRARLDKKP
SDCSTNMDIVEMFHLQTWKMDVRGGS
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccatcatcttccaaacccaaaaccctaaccctagattctacagctttattt
ctccaatccccacaaacaacttgtcctccactttctttctctcttctttcctcgcgctct
cctctacctccaatgcccacagattttcccctttccaaacttatccccaaaactaaattt
atcgttgacggcttccgattatccggcgactactccgtatcgtacttcctctcacatttc
cactcagaccactacggcggactcaatgcgaactggtctaaaggaattatcttttgttca
gagattactgcccgccttgttattcaagtacttcaagtttcggcatcattagtggtgcct
ttgcctttgtcggagtcagtttttatcgacggctgtgagatttcactggtcgacgcaaat
cattgccccggtgcagtccagttcttgttcaaaatcccgactggggacgggagttgcgag
aggtatgtgcataccggtgactttaggtattctgtttctatgaaatccgaaactgttctg
aacgaatttacgggtgctgatgccgttttcctggatactacttattgtaatccgaaatac
gtgtttccttcgcaacaggagtccattgattatgtagttagtgtgattaacaagtatagc
cttgagaatgatggtggtttaaagtctgttttgtttcttgttgccacttatgtcattggg
aaagagaaaatcctgcttgagatttcacgtaggtgtaagagaaagatacatgttgatgac
agaaaattgggtattctgcatactctagggtttggagaagatgaagtatttaccactaaa
gaatctgaaagtgatgttcatgttattgggtggaatgttttaggtgaaacctggccttat
ttcagacctaattttgcaaaaatgaatgaaatcaaggatgctaaagggtattctaaggtg
gtgggatttgttccaacagggtggacctatgaagtaaagcataacaagtttgctgtaagg
acaaaagacccatttgaaatacatttagtaccttatagtgaacactcaaactatgaagaa
cttagagagtatgtaaagttcttaagaccaaaacgtgttattccaacagtaggtgtggat
gttgagaatcttgatgggaaacatgttaataaaatgttaaagcattttgcaggattggtt
gatgacatggcaatcaagcaagatttcttgaagggctttcatcgtgggtccaagggacaa
aatgagaatcttgagaaagatccacaaaaggaaaaagaagctaaaaatgattctttttca
ctttgtgatcagaaagatgaacatgaaacagatgaaatgttgcaggagcttcttgattgt
ttgcctgattgggtcactagagcccaaatgatggatgttttaagtaaatcaagaaagaat
gttgttgaatctgtttcttatttttatgaacatgaaactgaatattatgaacagatcatt
acaagtgtatccacttctgcatcacaggaaaatccagttgagattctcaaagaagtcatt
gcacatgcttcatccacctcatccaaaggctttacatcaccttcacctcctgttaaatct
ttattaaaaactgatgatgtttcttcaagtaaaagaatgacatcatccaccattaaacaa
accaaaagtatcaattctccaaacaaaaagaaacaatcaagttcaagtaaaaacaccatt
tctcccaaccaaaagaggaagaagatcaatgacaatatttcaagcaagaagccaaaaatc
acttcacaagatggatctaatggaccaaagcaatgcacaatcactaagttcttcaataaa
ctctcacctgtggttgaaatatccaacaatgatgtcatcaagacttacaaagatgaagta
gatcagttcatacaaatcataaatggcaatgagtcattgcatgattatgctacaaccctt
ttagaggaaacaaagggtgatatcaacaaagctcttgacttgtattacttaaaagataaa
caaagtgaaaatcaaaagaggatcttttctaatgaagacactgaagcatctcaagatctt
atatcacttccacctgagaaatactctcccatagaccatgcttgctggaaagatggagag
tttgctccctatttacatcttgccaggacattcaatttggtggagggcgaaaaaggaaag
attaaagctacatctatgctctgcaatatgtttagaagcttgttaattttgtcacctgag
gatgtgttgccagctgtgtacttgtgcacaaataagattgcccctgatcatgaaaacacg
gaactgaacattggtggaagtattgtgacatcagcaatggaagaggcatgtggaacaaac
agattgaagattcgtgaattgtacaacactttaggtgatcttggtgatgtggctcaacta
tgtcgccagacacaaaggttactagcacctccagctccactctcaatcagacgagtttat
tcagttcttcgagaaataagtgtacaaacaggtaatggaagtacattgcgtaaaagaaac
ctcattattaatctaatgagatcttgtagagagatggagatcaagtttatagtcagaaca
ttggtcaagaatttaagaattggagccatgatgagaactgttcttccttcattagctcag
gctattcttttgaactcttcccatgaaacaaccaaagaaacacttcagggactcagtgca
gcagttgtggaagcatataacatgctcccgaatttagatttgcttattccttctttgatg
gaaaaagggattcagttttcttcatcaacattatcaatgcttccaggcatacccattaag
ccaatgcttgcaaaaattactaatggaatccctcaagtcttgaagctatttcaaggaaaa
gcctttacttgtgaattcaaatatgatggacaacgtgcccaaattcacaaattacctgat
ggatctatacgtgtattttcaagaaatggagatgaaacaacttcaagatttccagattta
ataaatataataaatgatacttgcaataaagataccatgtctttcataattgatgcagag
gtggtggctgttgatagaaaaaatggtggcaagcttctatcttttcaagaactatcttcc
cgtgatagagggagtaaaaattcatctattttagtagataatataaaggttgatatatgt
gtctttgtatttgatgtcatgtttgctaatggaaaacagctgttgggcttccctctgcgc
gagagaagaaaatatatgaaaggtttatttggtgatgaaaagagtggatattttgaatat
tcacaggaaataacagtggagatggatgatgctgacgtggcaaatgaagctacagtgagt
aaaatgaatcggttttttgatgaagcttttcattcatcatgtgagggactcatgtttaag
tctcttgatgttgatgctggttatcttccatcaaagcgttcagattcttggttaaaggtg
aaacgtgattatgtagaagggttaaatgattcccttgacttggttcctattggtgcttgg
tatggaaatggaagaaaagccggatggtatagtccgtttctaatggcgtgctatgatcct
gacaccgaggagtatcaaagtgtttgccgcgtaatgtcgggattctctgacgccttctat
aaagagatgaaagagttttttgttgatgagaagatgatgtcgaaaaatgagaaaccggtg
tattatcaaacgggtgaggagccggatatgtggtttagtcctgaagtggtgtgggagata
cggggggcggacttcaccgtgtcgccggtgcaccatgcggctatgggtttggtgcacccg
tcacgtgggatttcggttagattcccgaggtttattagggcgaggttagataaaaagccg
agtgattgtagcacaaatatggatatagttgaaatgtttcatttacaaacttggaagatg
gatgttcggggtggtagttga
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