Lipotes vexillifer (Yangtze River dolphin): 103076516
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Entry
103076516 CDS
T03090
Symbol
TRIM62
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM62
KO
K12030
tripartite motif-containing protein 62 [EC:
2.3.2.27
]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lve04121
]
103076516 (TRIM62)
Enzymes [BR:
lve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103076516 (TRIM62)
Ubiquitin system [BR:
lve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
103076516 (TRIM62)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
GlgE_dom_N_S
zf-RING_10
KxDL
DUF1664
Ribosomal_L37ae
U-box
zf-ANAPC11
Fib_alpha
DUF2383
zf-Nse
Sec63
AAA_13
TMEM191C
DUF5955
DUF4776
DUF2884
GCP_C_terminal
Vps39_1
Phasin
CorA
Uso1_p115_C
DUF4795
Mis12
OmpH
Gp-FAR-1
Sec10_N
Prominin
Motif
Other DBs
NCBI-GeneID:
103076516
NCBI-ProteinID:
XP_007468763
UniProt:
A0A340Y6A8
LinkDB
All DBs
Position
Unknown
AA seq
475 aa
AA seq
DB search
MACSLKDELLCSICLSIYQDPVSLGCEHYFCRRCITEHWVRQEAQGARDCPECRRTFAEP
ALAPSLKLANIVERYSAFPLDAILSARRAARPCQAHDKVKLFCLTDRALLCFFCDEPALH
EQHQVTGIDDAFEELQRELKEQLQALQDSEREHTEALQLLKRQLAETKSSTKSLRTTIGE
VFERLHRLLRERQKAMLEELEADTARTLTDIEQKVQRYSQQLRKVQEGAQILQERLAETD
RHTFLAGVASLSERLKGKIHETNLTYEDFPTSKYTGPLQYTIWKSLFQDIHPVPAALTLD
PGTAHQRLILSDDCTIVAYGNLHPQPLQDSPKRFDVEVSVLGSEAFSGGVHYWEVVVAEK
TQWVIGLAHEAASRKGSIQIQPSRGFYCIVMHDGNQYSACTEPWTRLNVRDKLDKVGVFL
DYDQGLLIFYNADDMSWLYTFREKFPGKLCSYFSPGQSHANGKNVQPLRINTVRI
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcagcctcaaggacgagctgctctgctctatctgtctgagcatctaccaggac
ccggtgagcctgggctgcgagcactacttctgccgccgctgcatcaccgagcactgggtg
aggcaggaggctcagggcgcccgcgactgccccgagtgccggcgcacgtttgccgagccc
gcgctcgcgcccagcctcaagctggccaacatcgtggagcgctacagcgccttcccgctg
gacgccatcctcagtgcacgccgtgccgcgcgaccctgccaggcacacgacaaggtcaag
ctcttctgcctcacggaccgcgcgctgctctgctttttctgcgatgaacccgcgctgcac
gagcagcaccaggtcacgggcatcgatgacgccttcgaggagttgcagagggagctgaag
gagcagcttcaggcccttcaggacagtgagcgggagcacacggaggcgctgcagctcctc
aagagacagctggcggagaccaagtcttccaccaaaagcctgcggaccaccattggggag
gtctttgagcggctgcaccggctgctgcgggaacggcagaaggccatgctggaggagcta
gaggcagacacggcccgcacactgactgacattgagcagaaagtccagcgctacagccag
cagctgcgcaaggtgcaggagggggcccagatcctgcaggagcggctggctgaaactgac
cgacacaccttcctggccggggtggcctcgctgtctgagcggctcaaagggaaaatccat
gagaccaatctgacctacgaagacttcccaacctccaagtacacaggccccctgcagtac
accatctggaagtccctgttccaggacatccacccagtgccagccgccctgaccctggac
ccgggcaccgcccaccagcgcctcatcctgtccgacgactgcaccatcgtggcctacggc
aacctgcacccacagccgctgcaggactcaccgaagcgcttcgatgtggaggtgtcggtg
ctgggctctgaggccttcagtggcggcgtccactactgggaggtggtggtggcggagaag
acccagtgggtgatcgggctggcacacgaagccgcgagccgtaagggcagcatccagatc
cagcctagccgcggcttctactgcatcgtcatgcacgatggcaaccagtacagcgcctgc
accgagccctggacgcggctcaatgtccgcgacaagctcgacaaggtgggcgtcttcctg
gactacgaccaagggctgctcatcttctataacgccgatgacatgtcttggctgtacacc
ttccgcgagaagttccccggcaagctctgctcctacttcagccccgggcagagccatgcc
aatggcaagaacgtgcagccactgcggatcaacacggtccgcatctag
DBGET
integrated database retrieval system
