Lipotes vexillifer (Yangtze River dolphin): 103084236
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Entry
103084236 CDS
T03090
Symbol
REXO1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103084236 (REXO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lve03009
]
103084236 (REXO1)
Ribosome biogenesis [BR:
lve03009
]
Eukaryotic type
Pre-60S particles
RNases
103084236 (REXO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
103084236
NCBI-ProteinID:
XP_007460418
UniProt:
A0A340XG62
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MLRSTGFFRTIDCPYWAGSPGGPCRRPYCHFRHRGARGPGSPGEGGAAPPAAGLGYDPYN
PELPKPPAQRENGALGRGAEPRSDILELELVNQAIEAVRSEVELEQRRYRELLETAREHG
SAEAPALAPHGPTAGLDGDTFPLSFEYNPGGHGLLSPDASYQPTPLASHTEPGTKYSLAS
LDRGQGHGGGAGGTLEYVPKAVGQPRRYGRPVSSGKYVVDNSKPSTDLEYDPLSNFSARL
LSRASTKDDRAPKRPRGSRGSEPYTPAPKKPCDPFGGCDARFSDSDDDTAAAPGDRPATA
SPPRARAGPESKAPGKPGSREGPEPEEGSLRETKEMAVQYDVGDLGQPAKGPGGLPPAKP
SSPGRASQERSSPKEGRPKKKKSGGPPAAGRKDGVGKTGRGQDGEHGRPAEKPCVDRRGP
RAGSPRHRAERPQGTKKKPSSATPVASSGKGQPEGPGPRPSPAQGAAHQLPDRTGRKTPS
GKLAQRKARSLDEGAPRGAPKLPRRALSHAELFGDESEDEDPGPEAPTPRPPALPSLSSS
SDSDSDSSLGLCGARGPPKRLKASPPPSASRSSPPPHSSSSSGAGSDVGYSALEKEVDSD
SDPMEECLRIFNESTAVKTEDKGRLARQPPKEEKTEEQGRPGLTTLFPGQKRRISHLSKQ
GKEAEPTSRGPAPPTRPPTAQEVCYRRAQQAQRESASRLQAAQPLAEKQSSVHISAPGEK
RRIAHVPNPLLAAAPTGAKRTLSASSSQPPSGPEPGSQPLKTRTLSGMASKTTATVAPKR
VAHSPSLQSLKKPVIPKEFGGKVPTVIRQRYLNLFIEECLKFCSSNQEAIEKALNEEKVA
YDRSPSKNIYLNVAVNTLKKLRGLGPGTGPGLNKPSGRRVVSHEVVLGGKLAAKTSFSLS
RPSSPRVEDLKGAALYSRLKEYLLSEAQLKENGYPFPHPEKPGGAVIFTAEEKQPKDPTC
RVCCRCGAEYLVSSAGRCMRDEECYYHWGRLRRNRVAGGWETQYTCCSAAIGSAGCQVAK
QHVQDGRKENLEGFVKTFEKELSGDAHPGVYALDCEMSYTTYGLELTRVTVVDTELQVVY
DTFVRPDNEIVDYNTRFSGVTEADLTDTSISLRDVQAVLLSMFSSDTILIGHSLESDLLA
LKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVI
WKIREDAKTKR
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgctacgctccaccggcttcttccggaccatcgactgcccctattgggccgggtcgcct
gggggaccctgccggcggccctactgccacttccggcaccgcggggcccggggcccgggc
tcacctggagaaggcggagcggcgccccccgcagcagggctcggttatgacccgtacaac
cccgagctgcccaagccccctgcccagagggagaatggcgccctgggcagaggtgccgag
ccccgctcagacattctggagctggagctggtcaaccaggccatcgaggccgtgcgctct
gaggtggagctggagcagaggcgctaccgggagctcctggagacggcccgggagcacggc
tcggccgaggcccctgccctggcgccccacggccccactgccggcctggatggggacacc
ttccctctgtccttcgaatacaaccctggcggccatggcctgttaagccctgatgccagc
taccagcccacgcctctggccagccacaccgagcctggcaccaagtactcgctggcctct
ctggaccggggtcagggccatggtggaggggctggtggcaccctggagtacgtccccaag
gccgtgggccagccccggcggtatggccgccccgtctccagcggcaagtacgtagtggac
aactccaagccatctacagacctggaatacgaccccctgtccaacttctccgcccgcctg
ctcagcagggccagcaccaaggacgacagggcccccaagcggccccggggctcccgcggc
agtgagccctacacacctgcacccaagaagccctgtgaccccttcggtggctgcgacgcc
aggttctcagactctgacgatgataccgctgctgctccgggcgacaggcccgccaccgcc
agccccccgagagcccgagcgggccctgagagcaaggccccggggaagccgggctctagg
gagggcccagagcctgaggagggcagccttcgggagaccaaggagatggccgtgcagtac
gacgtgggggaccttggtcagcctgccaagggcccaggcgggctgcctcctgccaagccc
agctccccgggcagggcctcgcaggagcgcagcagccccaaggaggggagacccaagaag
aagaaaagcggggggccgccagccgccggccgcaaggatggtgttgggaagacaggcagg
ggtcaggatggagagcatgggaggccagccgagaagccctgtgtggacaggaggggcccg
cgggccggcagcccccggcacagggcggagcggccccaagggaccaagaagaagccatct
tcagccactccggtggccagctcagggaaaggccagcccgaggggccgggaccgcggccc
agccccgcacaaggggccgcccaccagctgccagacaggacgggcaggaagaccccgtca
gggaagctggcacagcggaaggcccgctcgctggatgagggtgccccccggggtgccccc
aagctgccgaggcgggccctgagccacgccgagctcttcggggatgagagcgaggacgag
gacccggggcccgaggcgcccaccccgcggccgcccgccctccccagcctcagctccagc
tccgattcggactcggactccagcctgggcctctgcggcgcgcgggggccgcccaaacgc
ctcaaggcctccccgcccccctcggccagccggtcctcccctcccccccactcctcctcc
tcctcgggggcgggctccgacgtgggctactcggccctggagaaggaggtcgactctgac
tccgaccccatggaggagtgcctgcgcattttcaacgagtccaccgctgtcaagacggag
gacaagggccgcctggcccggcagccccccaaggaggagaagaccgaggaacaggggcgc
ccgggcctgaccactctgtttcctgggcagaagaggaggatctctcacctctccaagcaa
ggcaaggaggcagagcccacaagcagaggcccagcgcctcctacccgtcccccgactgcc
caggaggtgtgctaccgccgggcccagcaggcacagagggagtcagccagccggctccag
gctgcccagccactggccgagaagcagtcctccgtgcacatctcagcccccggagagaag
aggaggattgcccacgtccccaaccccctcctggctgcagcccctacaggtgccaagagg
accctctcggccagcagcagccagccccccagtggccccgagccgggcagccagcccctg
aagacgcgcacgttgtcgggcatggcgtccaagactactgccaccgtggcccccaagcgt
gtggcgcacagtccatccttacagagtttaaagaagcctgttatcccaaaagagttcggg
ggcaaagtccccactgtcatccgccagcgctatctcaacctgttcattgaagagtgcctc
aagttttgctcttctaaccaggaagccatagagaaggcgctcaacgaggagaaggtggcc
tacgaccggagccccagcaagaatatctacctgaacgtggccgtgaacaccctcaagaag
ctgcgcggcctgggccctggcaccgggcctggtctcaacaaacccagcggccggagggtg
gtgtcccatgaagtggtgctggggggcaagttggctgccaagactagcttttcgctcagc
cgtcccagcagcccccgcgtggaggatctgaaaggggccgccctgtacagccgcctcaag
gagtacctgctctccgaggcccagctcaaggagaacggctacccctttccgcaccccgag
aagccaggcggcgccgtcatcttcacggccgaggagaagcagcccaaggaccccacctgc
agggtctgctgccgctgcggcgccgagtacctcgtgtcctccgccggccgctgcatgcgc
gacgaggagtgttactaccactgggggcggctccgccggaaccgagtggcagggggctgg
gagactcagtacacgtgctgctcggccgccattggctccgctggctgtcaggtcgccaag
caacacgtgcaggacggccggaaggaaaacctcgaagggtttgtgaagacctttgagaaa
gaactttcaggagatgcacacccaggagtctacgccctcgactgtgaaatgtcttacacc
acgtatggcctagagctgacgcgcgtcacggtcgtggacacggagctccaggttgtgtac
gacacctttgtcaggccggacaatgagatcgtggactataacactaggttttcaggggtg
actgaggccgacctcacggacacgagcatctcgctgcgggatgtccaggccgtcttgctg
agcatgttcagttcagacaccatcctcattggccacagcctggagagcgacctgctggcc
ttgaaggtcatccatagcaccgtggtggacacgtccgtgttattcccgcatcgcctgggc
cttccctacaagcgctccctgcggaatctcatggccgactacctcagacagatcatccag
gacaatgtggacgggcacagctccagtgaggacgccagcgcctgcatgcacctggtgatc
tggaagatccgcgaagacgccaagaccaagcggtga
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