Lipotes vexillifer (Yangtze River dolphin): 103084469
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Entry
103084469 CDS
T03090
Symbol
DICER1
Name
(RefSeq) LOW QUALITY PROTEIN: endoribonuclease Dicer
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
lve
Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
lve00001
]
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
103084469 (DICER1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lve03036
]
103084469 (DICER1)
Chromosome and associated proteins [BR:
lve03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103084469 (DICER1)
microRNA pathway
RISC loading complex
103084469 (DICER1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_platform
Dicer_dsRBD
Ribonuclease_3
Dicer_PBD
Ribonucleas_3_3
Dicer_dimer
PAZ
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
103084469
NCBI-ProteinID:
XP_007447384
UniProt:
A0A340WJU9
LinkDB
All DBs
Position
Unknown
AA seq
1922 aa
AA seq
DB search
MNEKPCFATLSMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHN
TIVCLNTGSGKTFIAVLLTKELSYQIRGDFNRNGKRTVFLVNSANQVAQQVSAVRTHSDL
KVGEYSNLEVSASWTKEKWNQEFTKHQVLVMTCYVALNVLKNGYLSLSDINLLVFDECHL
AILDHPYREIMKLCENCPSCPRILGLTASILNGKCDPEELEEKIQKLEKILKSNAETATD
LVVLDRYTSQPCEIVVDCGPFTDRSGLYERLLMELEEALNFISDCNISVHSKERDSTLIS
KQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALC
EEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDE
EDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFI
TGHGIGKNQPRNKQMEAEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDL
PTEYRSYVQSKGRARAPISNYVMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDTGET
DIEPVVDDDDVFPPYVLRPDDGGPRVTINTAIGHINRYCARLPSDPFTHLAPKCRTRELP
DGTFYSTLYLPINSPLRASIVGPPMSCIRLAERVVALICCEKLHKIGELDDHLMPVGKET
VKYEEELDLHDEEETSVPGRPGSTKRRQCYPKAIPECLRDSYPKPDQPCYLYVIGMVLTT
PLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFTLS
LQMLELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMED
IEKSEARIGIPSTKYSKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSK
FPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEK
RKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLLTAEELRAQTAGDAG
VGVRSLPADFRYPNLDFGWKKSIDSKSFISVANSSSAENENHCKHSTVVILENAARQGAN
RTSCLENHDQMSVNCRTLFESPGKLQIEVSTDLTAINGLSYNKNLANGSYDLANRDFCQG
NHLNYYKQEIPVQPTTSYPIQNLYNYENQPKPSDECTLLSNKYLDGNANKSTSDGSPTMA
AVPGTTETGKALTDRTASEQSPSPGYSSRTLGPNPGLILQALTLSNASDGFNLERLEMLG
DSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVSIFDPPVN
WLPPGYVVNQDKSNTEKWEKDETTKDCMLANGKLDDDFEEEEEGGGLTWGAPKEDADDEE
DFLEYDQEHIKFIDSMLMGSGAFVKKISLSAFSATDSAYEWKMPKKSSLGSIPFSSDFED
FDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCGVDTGKQSISYDLHTEQCIADKSIA
DCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGS
RAAASGAGPRSSVLKDVEYGCLEIPPRCMFDHPDADRTLSHLISGFENFEKKISYRFKNK
AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV
NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKNEMQGMDSELRRSEEDEEKEE
DIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYPMMRPLIEKFSANVPRSPVRELLEM
EPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRSYRIAKSAAARRALRSLKANQPQVP
NS
NT seq
5769 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaagccctgctttgcaaccctcagcatggcaggcctgcagctcatgacccct
gcttcctcaccaatgggtcctttctttggactgccatggcaacaagaagcaattcatgat
aacatttatacgccaagaaaatatcaggttgaactgcttgaagcagctctggatcataat
accatagtctgtttaaacactggctcagggaagacgtttattgcagtactactcactaaa
gagctgtcctatcagatcaggggagacttcaacagaaatggcaaaaggacggtgttcttg
gtcaactctgcaaaccaggttgctcaacaagtgtcagctgtcagaactcactcagatctc
aaggttggggaatactcaaacctggaagtaagtgcatcttggacaaaagagaaatggaac
caagagtttactaagcaccaggttctcgttatgacttgctatgtcgccttgaatgttttg
aaaaatggttacttatcactatcagacattaaccttttggtgttcgacgagtgtcatctt
gcaatcctagaccacccctaccgagaaattatgaagctctgtgaaaattgtccatcatgt
cctcgtattttgggactaactgcttccattttaaatgggaaatgtgatccagaggaattg
gaagaaaagattcagaaactggagaaaattcttaagagtaatgctgaaactgcaactgac
ttggtggtcttagacagatatacttctcagccatgcgagattgtggtagactgtggacca
tttactgacagaagtgggctttatgaaagactgctgatggaattagaggaagcacttaat
tttatcagtgactgtaacatatctgtacattcaaaagaaagagattctactttaatttct
aaacagatactctcagactgtcgtgcggtattggtagttctgggaccctggtgtgcagat
aaagtagctggaatgatggtaagagaactacagaaatatatcaaacacgaacaagaggag
ctgcacaggaaatttctattgtttacagacactttcctaaggaaaatccatgcactatgt
gaagagcacttctcacctgcctcacttgacctgaaatttgtaactccgaaagtaataaaa
ctgcttgaaatcttacgcaaatataaaccgtatgagcgacagcagtttgaaagtgttgag
tggtataataataggaatcaggataattacgtgtcttggagtgattctgaggatgatgag
gaggatgaagaaattgaagaaaaagaaaagccagagacaaattttccttctccatttacc
aatattttgtgtggaattatttttgtggaaagaagatatacagcagttgtcttaaacaga
ttgataaaggaagctggcaaacaagatccagagctggcttacatcagcagcaattttata
actggacatggcattggaaagaatcagcctcgtaacaaacagatggaagcagaattcaga
aaacaggaagaggtacttaggaaatttcgagcacatgaaaccaacctgcttattgcaaca
agtattgtggaggagggtgttgacataccgaaatgcaacttggtggttcgttttgatctg
cccacagagtatcgatcctatgttcaatctaagggaagagcgagggcaccgatctctaat
tatgtaatgttagcagatacagacaaaataaaaagttttgaagaggaccttaaaacatac
aaagctattgaaaagatcttgagaaacaaatgttccaagtcagttgataccggtgagact
gacattgagcctgttgtggatgatgatgatgttttcccaccatatgtgttgaggcccgat
gatggtggtccacgagtcacaatcaacacggccattggacacatcaatagatactgtgct
agattaccaagtgatccgtttactcacctggctcctaaatgtagaacccgagagttgcct
gatggtacattttattcaactctttatctgccaattaactcacctcttcgagcctccatt
gttggtcccccaatgagctgtatacgattggctgaaagagtcgtagctctcatttgctgt
gaaaaactgcacaaaattggcgaactggatgaccatttgatgccagttgggaaagagact
gttaaatacgaagaagagctggatttacatgacgaagaagagaccagtgttccaggaaga
ccaggctccacaaaacgaaggcagtgctacccaaaagcgattccagaatgtttgagggat
agctaccccaagcccgatcagccttgttacctgtatgtgataggaatggttctaacgaca
cctttacctgatgaactcaactttagaaggcggaagctttatccccctgaggataccaca
agatgctttggaatactgacagccaaacccatacctcagatcccgcactttcctgtgtac
acacgctctggagaggttaccatatctattgagttgaagaagtctggtttcacgttatct
ctacaaatgcttgagttgattacaagacttcaccagtatatattctcacatattcttcgg
cttgagaaacctgcactagaatttaaacccacagacgctgactcagcatactgtgttcta
cctcttaatgttgttaatgactccagcactttggacattgactttaaattcatggaagat
atcgagaaatctgaagctcgcataggcattcccagtacaaagtattcaaaagaaaccccc
tttgtttttaaattagaagattaccaggatgcagttatcattccaagatatcgcaatttt
gatcagcctcatcgattttatgttgctgatgtgtacactgatcttacccccctgagtaaa
tttccttcccccgaatacgaaacttttgcagaatattataaaacaaagtacaaccttgac
ctgaccaatctcaaccagccgctgctggatgtggaccacacatcttcaagactgaatctt
ctgacacctcgccatttgaatcagaaggggaaagctcttcctctaagcagtgctgaaaag
aggaaagccaaatgggaaagtctgcagaataaacagatactggttccagaactctgtgct
atacatccaattccagcatcactgtggagaaaagcggtttgtctccccagcatactttat
cgccttcactgccttttgaccgcagaggagctaagagcgcagacagccggcgacgctggt
gtgggagtgaggtcactgcccgcggattttagataccccaacttagacttcgggtggaaa
aaatctattgacagcaaatctttcatctcagttgctaactcctcttcagctgaaaatgag
aatcactgtaagcacagcacagttgtcatccttgaaaatgctgcacgtcaaggtgctaat
agaacctcctgtctagaaaatcatgaccaaatgtctgtgaactgcagaacgttgttcgag
tcacctggtaagctccaaattgaagtttcaacagatcttacagcaattaatggtctttct
tacaataaaaatctcgccaatggcagttacgatttagctaacagagacttttgccaagga
aaccatctgaattactacaagcaggaaatacctgtacaaccaactacctcatatcccatt
cagaatttatacaattacgagaaccagcccaagcccagcgatgaatgtactctactgagt
aataaataccttgatggaaatgctaacaaatctacctcagatggaagtcccacgatggcc
gccgtgcctggtactacagagactggtaaggcgctcacggacaggacggcttctgagcag
agcccttctcccgggtactcctcgagaacgcttggcccaaaccctggacttattcttcag
gctttgaccctttcaaacgctagtgatggatttaacctggagcggctcgaaatgcttggc
gactccttcctaaagcatgccatcaccacgtatctcttttgcacttaccccgatgctcac
gagggccgcctttcctatatgagaagcaaaaaggtcagcaactgtaatctgtatcggctt
ggaaaaaagaaggggctgcccagccgcatggtggtgtcaatatttgatccccctgtgaat
tggcttcctcctggttatgtagtaaatcaagacaaaagtaacacagagaaatgggaaaaa
gatgaaacaacaaaagactgcatgttggctaatggcaagctggacgatgacttcgaagag
gaggaggagggggggggcctgacgtggggggctccgaaggaggacgccgatgacgaggag
gacttcctggagtacgaccaggagcacatcaagttcatagatagcatgctgatgggatct
ggagcttttgtcaagaaaatctcgctttctgctttttcagccactgattccgcctatgaa
tggaaaatgcccaaaaaatcctccttaggtagtataccattttcatcagattttgaggat
tttgactatagctcttgggatgcaatgtgctatctggatcctagcaaagctgttgaagag
gatgactttgtggtggggttctggaatccatcagaagaaaactgtggtgttgacacaggg
aaacagtccatttcttacgacctgcacaccgagcagtgcattgccgacaaaagcatagcc
gactgtgtggaagccctgctgggctgctatttaaccagctgtggcgagagggctgctcag
cttttcctctgttcgctggggctgaaggtgctcccggtaattaagaggactgatcgggaa
aaggccatgtgcccgaccagggagaatttcaccagccaacaaaagaacctttcagggagc
cgcgctgccgcctctggagctggcccccgctcctctgtgttgaaagacgtggagtatggg
tgtttggagatcccaccgaggtgcatgtttgatcacccagatgcagataggacactgagt
caccttatctcggggtttgaaaatttcgaaaagaaaatcagctacagattcaagaataag
gcttacctactacaggcttttacacacgcctcctaccactacaacactatcactgattgt
taccagcgcttagaattcctgggagatgcaattttggactacctcataaccaagcacctt
tatgaagacccacggcagcactccccaggggtcctgactgacctgcgctcggctctggtc
aacaacaccatctttgcatcattggctgtgaagtatgactaccacaagtactttaaagca
gtttctcctgagctcttccacgtcatcgatgattttgtgcagtttcagctcgagaagaat
gaaatgcaagggatggattctgagcttaggagatctgaggaggatgaagagaaggaagag
gatattgaagttccaaaggccatgggggatattttcgagtcgcttgctggtgccatttac
atggatagcgggatgtcgctggagatggtttggcaggtgtactatcctatgatgcggccg
ctgatagaaaaattttctgcaaatgtgccccgttcccctgtgcgagaattgcttgaaatg
gaaccagaaaccgccaaatttagcccggctgagagaacttatgacggcaaggtcagagtc
accgtggaagttgtaggaaaggggaaattcaaaggtgttggccgaagttacaggatcgcc
aaatctgcagcggcaagacgagccctacgaagcctcaaagctaatcaacctcaggttccc
aacagctga
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integrated database retrieval system
