Methanococcus aeolicus: Maeo_0134
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Entry
Maeo_0134 CDS
T00552
Name
(GenBank) protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mae
Methanococcus aeolicus
Brite
KEGG Orthology (KO) [BR:
mae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mae03016
]
Maeo_0134
Enzymes [BR:
mae01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Maeo_0134
Transfer RNA biogenesis [BR:
mae03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Maeo_0134
Prokaryotic type
tRNA splicing ligases
Maeo_0134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
LAGLIDADG_3
Intein_splicing
Motif
Other DBs
NCBI-ProteinID:
ABR55726
UniProt:
A6UTA4
LinkDB
All DBs
Position
149718..152609
Genome browser
AA seq
963 aa
AA seq
DB search
MELNKISDNSWELPKTYKKEMKVPGRIYLNDDLIGGLENDVLEQVANVACLPGIQKYSMA
MPDAHYGYGFPIGGVAAFDEKMGVISPGGVGFDINCLSTDSNILTDDGYWVNIESLKENL
DLKLKIYDIKEGQNDSSDVVFVSERDEDNNIIRTKTNNGRILKGSADHPILTLNGYVPMG
MLKEEQDVVVYPFEGVEYEEPSDEVILDEKNFAKYDAQIIKYLNERNLLPLKMNHKQIGA
IARLLGFALGDGSIVQENGERKRIYLAFYGKKDELIEVKKDLEKLSVKSSKIYSRNREIK
IKNAWGSEYVSSCKDNYIKITSKAFALFMHKLGMPIGTKTHIEYTIPKWIKKSPLWVKRN
FLAGLFGADGSKICFRKYTPMPISFTQSKSDVLKDSLLNYLADIKKMLSEFGICSMVYEI
KAVENKVVYRLSIVNEKSIKLFLGHIGYEYSKDKKEEGLFAYEYLKYKDTVKNIRKNSIV
KAIDIYRKTGSLSKVCDGVVGKWANKKFVERTIYENRTVVRIPKNFPYYEEFVKKYGVAG
GFVLDKIKEIKKIPYNSKLYDVSILHQSHNFIANGVVVHNCGVRLVKTNLTKDEVQPKMK
ELLSKIFKNVPSGLGSKGKIRINKNQIEEVLEEGVNWAINNNYGWEEDIKYIEENGQMKE
ADASLVSDSAKKRGLPQLGSLGSGNHFLEIQYMDTVFDEEVAKIYGVEKNQVVILIHTGS
RGLGHQICADYLRYMEKAARKYNITLPDRQLACAPITSEEGQNYFKAMSCGANYAWTNRQ
LITHWIRESFEDIFKTSAEDLEMNILYDVAHNIAKKENHTINGKMKKVVVHRKGATRAFG
PDNEDIPAKYNTVGQPVIIPGDMGTSSYLMHGTNTAMEETFGSTAHGAGRIMSRAKALKM
YKSEDIISDLGKKGILVMADSKGVVAEECPESYKNIEFVADVVHNSGISLKVCKMKPMGV
VKG
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atggaattaaataaaattagtgataatagttgggagctcccaaaaacatacaaaaaagaa
atgaaagttcccggtagaatttatttaaatgatgatttaatcggaggacttgaaaatgat
gtattggaacaagttgcaaatgtggcatgtcttccgggtattcaaaaatattcaatggca
atgccagatgctcactatggctatgggtttccaattgggggagtggcggcatttgatgaa
aaaatgggagtaataagcccagggggtgtgggttttgatatcaactgcctatcaactgac
tccaacattttaacagatgatggatattgggtaaatattgaaagccttaaagaaaatctt
gatttaaaacttaaaatatatgatataaaagaaggacaaaatgactcatcagatgtagtt
tttgtctccgaaagagatgaagacaataatataataagaacaaaaacaaacaacggtaga
atattgaaaggtagtgcagaccatccaattttaacgctaaacggctatgtcccaatggga
atgttaaaagaagaacaagatgttgtagtttatccttttgaaggcgtggaatatgaagaa
ccatctgatgaagtaatattagatgaaaagaactttgctaaatatgatgcccaaataatc
aaatatttaaatgaaaggaatttattaccattaaaaatgaatcataaacaaataggagca
atagcacgattgttaggttttgctcttggcgatggaagtattgttcaggaaaacggggaa
agaaaaagaatatatcttgcattttatgggaaaaaagatgaattaatagaggttaaaaag
gatttagaaaaattaagtgtaaaaagttcaaaaatatattcgagaaatagggaaattaaa
ataaaaaatgcatggggaagtgaatatgttagctcatgtaaagataattatataaaaata
acttccaaagcatttgcgttatttatgcataaacttggaatgcccattggcacaaaaaca
catattgaatacaccattccaaaatggataaaaaaatcgccattatgggtcaaaagaaac
tttttagctggtttatttggtgcagacggtagtaaaatatgttttagaaaatatactcca
atgccaatatcatttactcaatcaaaatcagatgttcttaaagattctctcttaaattac
ctggcagatattaaaaaaatgctctctgagtttggtatatgtagtatggtgtatgagatt
aaagcagtggaaaataaggttgtttatcgactatccatagtaaatgaaaagagtataaag
ttatttttggggcatattgggtatgaatattccaaagataaaaaagaagagggattattt
gcttatgaatatttaaaatacaaagatacagtcaaaaacattagaaaaaacagtattgtt
aaggcaatagatatttacagaaaaactggaagtttatccaaagtatgtgatggtgtagtt
ggcaaatgggcaaataaaaaatttgtggaaagaacaatatatgaaaatagaacagtcgta
agaattccaaagaattttccatattatgaagaatttgtaaaaaagtatggagttgcagga
ggatttgttttggataaaataaaagaaattaaaaagattccatacaattcaaagttgtat
gatgtttccatactccaccagtcccataactttatagcaaatggggttgtggttcataac
tgcggagttagactggtaaaaaccaaccttacaaaagatgaagtgcaacctaaaatgaag
gagctcctaagtaagatatttaaaaatgttccatcaggattagggagcaaaggaaaaatt
agaataaataaaaatcaaatagaagaagttcttgaagaaggagtaaattgggccataaat
aataactatggatgggaggaagatataaaatatatcgaagaaaatggacaaatgaaggag
gcagatgcttcacttgtatcggacagtgccaaaaagagaggtcttccacagttaggttca
ttaggtagtggaaaccactttttagaaatacaatatatggatacagtgtttgacgaagaa
gtggcaaaaatatatggcgttgaaaaaaatcaggttgtaatattaatacatacaggttca
agaggtttggggcatcaaatttgtgccgattatcttagatatatggaaaaagcagctaga
aaatacaatataactttaccagatagacaacttgcatgtgctccaataacttcggaggaa
gggcaaaactactttaaggcaatgagttgcggagcaaattatgcttggacaaataggcaa
cttatcacacattggataagggaaagctttgaggacatatttaaaacttcggcggaagac
cttgaaatgaatatattatatgatgtggcacacaacattgcaaagaaagaaaatcacaca
ataaatggaaaaatgaaaaaagtagtagttcataggaaaggagcaactagggcatttgga
ccagataatgaggacataccagcaaaatataataccgttggtcagcctgtaattatacct
ggggatatggggacatcatcttatttaatgcatggaacaaataccgcaatggaagaaact
tttggttctacggcacatggtgcaggtaggataatgagtagggctaaggctttaaaaatg
tataaatcagaggatataattagcgatttggggaaaaagggaatattagttatggcagat
tcaaaaggtgttgtagcagaggaatgcccagaatcttataaaaatatagagtttgtggcc
gatgtagttcataattcaggtatatctttaaaagtatgtaaaatgaaacctatgggagta
gttaaaggataa
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