Paramagnetospirillum magneticum: amb4253
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Entry
amb4253 CDS
T00305
Name
(GenBank) Primosomal protein N' (replication factor Y) - superfamily II helicase
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
mag
Paramagnetospirillum magneticum
Pathway
mag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
amb4253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mag03400
]
amb4253
Enzymes [BR:
mag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
amb4253
DNA repair and recombination proteins [BR:
mag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
amb4253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
DEAD
PriA_3primeBD
ResIII
PriA_CRR
Helicase_C
zinc-ribbons_6
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BAE53057
UniProt:
Q2VZB8
LinkDB
All DBs
Position
4661586..4663727
Genome browser
AA seq
713 aa
AA seq
DB search
MMLPLPLGGAYDYAVGDEALRPGDFVEVPLGNRLVAGVVWGAGDGRVDMAKLRPVAHRLS
ARHLPEVSRRFVDWVAAYTLAPPGAVLKMAMSVPSALEPVPPILALRLAAAPPAFKDTAA
RRKVMEAAGRLPPLSAADLAREAGVGPAVVKGLVEAGVLDVVELPPPPAFAPPDLQAPRA
ELSPGQQDGADTLVAALGGGFSVQLIDGVTGSGKTEVYFEAVAEALARGKQVLVLLPEIA
LSAQWLDRFRRRFGVRPAMWHSDLGDATRRKTWRAVASGEAAIVVGARSGLFLPFHNLGL
IVVDEEHDPAFKQEDHVCYHARDMAVVRARLGGFPVVLASATPSLESLANVQAGRYGLIH
LPDRHAGAVLPDIVPVDLRRYPPPRGRWLSPQLVAALEEVMAAGEQAMLYLNRRGYAPLT
LCRTCGHRLQCPHCTAWLVEHRSAGRLICHHCGHHIRLPPKCPECEAEANFAACGPGVER
VAEEAALLFPNARIAVMTSDTCSGPHAAAEFVRRVSDHEIDLLVGTQIVAKGYHFPMLTL
VGVVDADLGLDGGDLRAGERTHQLLSQVAGRAGRAERPGRVLLQTYQPDHPVMRALRSGE
RDAFIAREAEARRDAGMPPYGRLAALILSGADVGIVESYARTLAKAAPRTEGVQVLGPAP
APMALLRGRHRRRFLVQSARSVNLQALLRDWLARAAPPKSVRVQVDVDPYSFM
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgatgctgcccctgccgctggggggggcctacgactacgcggtcggcgacgaggccttg
cggccgggcgatttcgtcgaggtcccactgggcaaccgtctggtggcgggcgtggtctgg
ggagcgggcgacggcagggtggacatggccaagctgcgcccggtggcgcaccggctgtcg
gcgcgccacctgcccgaggtgtcgcgccgcttcgtcgactgggtggccgcctacaccctg
gccccgcccggcgcggtgctgaagatggccatgagcgtgccctcggccctggagcccgtg
ccgcccatcctcgccctgcgtcttgccgccgcgccgcccgcattcaaggacaccgccgcc
cggcgcaaggtgatggaggcggccggacgcctgccgcccctgtccgccgccgatctggcc
cgcgaagccggggtcggccccgccgtggtcaagggactggtggaggcgggcgtgctggac
gtggtggaattgccgccgccgcccgccttcgccccccccgacctccaagcgccccgcgcc
gagctgtcgccgggccagcaggacggcgccgacaccctggtcgccgccctgggaggcggc
ttttcggtgcagctcatcgacggcgtcaccggatcgggcaagaccgaggtctatttcgag
gcggtggccgaggccctggcccggggcaagcaggttctggtgctgctgcccgagatcgcc
ctgtcggcccagtggctggaccgctttcgccgccgcttcggggtcaggcccgccatgtgg
cattcggacctgggcgatgccacgcggcgcaagacctggcgggccgtggcctcgggcgag
gccgccatcgtggtcggcgcccgctcgggcctgttcctgcccttccataatctcggtctg
atcgtggtggacgaggaacacgatcccgccttcaagcaggaagaccatgtctgctaccac
gcccgcgacatggcggtggtccgcgcccggctgggcggattcccggtggtgctggcctcg
gccaccccgtcgctggagagtctggccaatgtgcaggccggacgctatggcctgatccac
ctgcccgaccgccatgccggcgccgtgttgcccgacatcgtgccggtggatctgcgccgc
tatccgccgccccggggccgctggctgtcgccgcagctggtcgcggcgctggaagaggtg
atggcggcgggcgagcaggccatgctctacctcaaccgccggggctatgcgccgctgacc
ctgtgccggacctgcggccaccggctgcaatgcccccattgcaccgcttggctggtggag
cacaggtcggcgggacggctgatctgccatcattgcggccaccatatccgcctgccgccc
aaatgcccggaatgcgaggccgaagccaatttcgccgcctgcggccccggcgtggaacgg
gtggcggaggaagccgccctgctgttccccaacgcccgcatcgcggtgatgacctcggac
acctgttccggcccccatgcggcggcggagttcgtgcgccgggtctccgaccacgagatc
gacctgctggtggggacccagatcgtcgccaagggctatcactttcccatgctgaccctg
gtgggcgtggtggacgccgatctgggcctggacggcggcgatctgcgggcgggcgagcgc
acccatcaactgctgtcccaggtggcggggcgcgccggccgcgccgagcgccccggccgg
gtgctgctccagacctaccagcccgaccatccggtgatgcgggccctgcgctcgggcgag
cgcgacgccttcatcgcccgcgaagccgaggcccgccgcgacgccggcatgccgccctat
ggccgcctggccgccctgatcctgtcgggggcggatgtggggatcgtcgagtcctacgcc
cgcaccctggccaaggccgcgccccgaaccgagggggtgcaggtgctggggccggcgccc
gcccccatggccctgctgcgcggccgccatcgccgccgcttcctggtgcagagcgcccgc
tcggtgaatctccaggccctgctgcgcgactggctggcccgcgccgcgccacctaaaagc
gtgcgagtccaggtggacgtcgatccctacagcttcatgtga
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